RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 LCN1P31025 176 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 EPHA5P54756 1037 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 GPR176Q14439 515 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 GPR135Q8IZ08 494 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ZNF676Q8N7Q3 588 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 GHSRQ92847 366 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 RNF31Q96EP0 1072 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 FCRL1Q96LA6 429 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 COQ10AQ96MF6 247 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 BTBD2Q9BX70 525 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 MTIF3Q9H2K0 278 aaKnown RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 SRA1Q9HD15 236 aaKnown RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 MKKSQ9NPJ1 570 aaPredicted RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 STARD5Q9NSY2 213 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 SPHK1Q9NYA1 384 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 AKAP7Q9P0M2 348 aaPredicted RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 TRAPPC4Q9Y296 219 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 FXYD6-FXYD2A0A087WZ82 144 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ARL4DP49703 201 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 GZMKP49863 264 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ERVK-21P61565 698 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 SHC2P98077 582 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 HSF2Q03933 536 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 CRMP1Q14194 572 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ABHD17CQ6PCB6 329 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ZNF322Q6U7Q0 402 aaPredicted RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 ZNF767PQ75MW2 155 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 MEPCEQ7L2J0 689 aaKnown RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 GPALPP1Q8IXQ4 340 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 SMPDL3BQ92485 455 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 FXYD6Q9H0Q3 95 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 CA5BQ9Y2D0 317 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 SERTM1A2A2V5 107 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 NPIPB8E9PQR5 432 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 RFPL3O75679 317 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ADRA2AP08913 450 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 PVRP15151 417 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 HOXB9P17482 250 aaPredicted RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 OR3A3P47888 321 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 REEP5Q00765 189 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 MESP2Q0VG99 397 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ALG10BQ5I7T1 473 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 MRPL2Q5T653 305 aaKnown RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 QSOX2Q6ZRP7 698 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 HDDC2Q7Z4H3 204 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 OR13C5Q8NGS8 318 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 ARHGAP9Q9BRR9 750 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 MKRN2Q9H000 416 aaKnown RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 CDCP1Q9H5V8 836 aa15.06■□□□□ 0
PCDH1-203ENST00000394536 RANBP3Q9H6Z4 567 aaPredicted RBP15.06■□□□□ 0
PCDH1-203ENST00000394536 NRG2O14511 850 aaPredicted RBP15.05■□□□□ 0
PCDH1-203ENST00000394536 CSN2P05814 226 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 SYPP08247 313 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 AHCYP23526 432 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 SLC6A6P31641 620 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 ADH7P40394 386 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 GPLD1P80108 840 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 PYHIN1Q6K0P9 492 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 LRRC28Q86X40 367 aaPredicted RBP15.05■□□□□ 0
PCDH1-203ENST00000394536 SLITRK4Q8IW52 837 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 SFTPA1Q8IWL2 248 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 OR8D4Q8NGM9 314 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 ADAD1Q96M93 576 aaKnown RBP15.05■□□□□ 0
PCDH1-203ENST00000394536 PTCHD1Q96NR3 888 aa15.05■□□□□ 0
PCDH1-203ENST00000394536 CHD5Q8TDI0 1954 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 OR6C74A6NCV1 312 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 A8MUA0 341 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 FAM25EA8MYX2 175 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 L7N2F9 121 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 POU6F2P78424 691 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 ZMYND11Q15326 602 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 METRNLQ641Q3 311 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 METTL27Q8N6F8 245 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 PFN4Q8NHR9 129 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 TSEN15Q8WW01 171 aaKnown RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 SDHCQ99643 169 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 C1QTNF2Q9BXJ5 285 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 SIRT3Q9NTG7 399 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 FKBP14Q9NWM8 211 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 ICKQ9UPZ9 632 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 ZNF443Q9Y2A4 671 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 TMEM5Q9Y2B1 443 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 PLA2G10O15496 165 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 LALBAP00709 142 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 MNDAP41218 407 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 EEF1A2Q05639 463 aaKnown RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 ILF3Q12906 894 aaKnown RBP eCLIP15.05■□□□□ -0
PCDH1-203ENST00000394536 EFR3AQ14156 821 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 OR1Q1Q15612 314 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 DEFB110Q30KQ9 67 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 GXYLT1Q4G148 440 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 SFXN4Q6P4A7 337 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 ZNF793Q6ZN11 406 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 TP53I13Q8NBR0 393 aaPredicted RBP15.05■□□□□ -0
PCDH1-203ENST00000394536 NKD1Q969G9 470 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 TMEM43Q9BTV4 400 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 SOHLH2Q9NX45 425 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 HCN3Q9P1Z3 774 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 STON1Q9Y6Q2 735 aa15.05■□□□□ -0
PCDH1-203ENST00000394536 ANKRD36A6QL64 1941 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms