RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ZNHIT3Q15649 155 aaPredicted RBP13.92□□□□□ -0.18
GPC3-202ENST00000394299 SLC25A30Q5SVS4 291 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 LIPKQ5VXJ0 399 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 DESI1Q6ICB0 168 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 GATAD2AQ86YP4 633 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 CAMKK1Q8N5S9 505 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 OR4F15Q8NGB8 312 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 MCFD2Q8NI22 146 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 DNASE2BQ8WZ79 361 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 CLDN23Q96B33 292 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 OR52D1Q9H346 318 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 EXOSC4Q9NPD3 245 aaKnown RBP13.92□□□□□ -0.18
GPC3-202ENST00000394299 CUTCQ9NTM9 273 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 SIDT1Q9NXL6 827 aaKnown RBP13.92□□□□□ -0.18
GPC3-202ENST00000394299 EML5Q05BV3 1969 aa13.92□□□□□ -0.18
GPC3-202ENST00000394299 SOCS6O14544 535 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 CLPSP04118 112 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 NGFRP08138 427 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 AFF3P51826 1226 aaKnown RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 IFITM3Q01628 133 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 INAQ16352 499 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 PGGHGQ32M88 737 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 C19orf48Q6RUI8 117 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 SLC36A4Q6YBV0 504 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 THSD4Q6ZMP0 1018 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 LHFPL3Q86UP9 236 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 ZNF615Q8N8J6 731 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 GATSQ8NAP1 163 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 OR13C2Q8NGS9 318 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 OR51A7Q8NH64 312 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 OR1L3Q8NH93 324 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 B4GALNT2Q8NHY0 566 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 GATAD2BQ8WXI9 593 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 OSTF1Q92882 214 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 ABTB1Q969K4 478 aaPredicted RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 TMEM203Q969S6 136 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 EFHD2Q96C19 240 aaPredicted RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 SLC38A2Q96QD8 506 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 UBQLN3Q9H347 655 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 DNAJB12Q9NXW2 375 aaKnown RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 SIT1Q9Y3P8 196 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 TRAV27A0A087WT01 109 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 A0A1B0GWA3 101 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 UNC119BA6NIH7 251 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 C17orf105B2RV13 164 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 PRODHO43272 600 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 AK1P00568 194 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 SCG5P05408 212 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 GCGRP47871 477 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 MTNR1AP48039 350 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 RHAGQ02094 409 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 ZP2Q05996 745 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 GRM7Q14831 915 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 MINDY4Q4G0A6 757 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 VWA2Q5GFL6 755 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 C1orf189Q5VU69 101 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 CPOQ8IVL8 374 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 CADM2Q8N3J6 435 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 MFSD4AQ8N468 514 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 BCORP1Q8N888 145 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 ZSCAN1Q8NBB4 408 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 NACC2Q96BF6 587 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 CDADC1Q9BWV3 514 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 C6orf62Q9GZU0 229 aaPredicted RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 PCED1AQ9H1Q7 454 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 HINT3Q9NQE9 182 aaKnown RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 LANCL2Q9NS86 450 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 DIMT1Q9UNQ2 313 aaKnown RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 YARS2Q9Y2Z4 477 aaKnown RBP13.91□□□□□ -0.18
GPC3-202ENST00000394299 OR10H1Q9Y4A9 318 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 CDH10Q9Y6N8 788 aa13.91□□□□□ -0.18
GPC3-202ENST00000394299 ZNF749O43361 778 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 RAB36O95755 333 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 UGT2B10P36537 528 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 PSMD7P51665 324 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 FUT7Q11130 342 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 ATP1A4Q13733 1029 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 SHBQ15464 509 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 TCTE1Q5JU00 501 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 AADACL4Q5VUY2 407 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 GARNL3Q5VVW2 1013 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 USP43Q70EL4 1123 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 ZFP41Q8N8Y5 198 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 PTPMT1Q8WUK0 201 aaPredicted RBP13.9□□□□□ -0.18
GPC3-202ENST00000394299 TM9SF4Q92544 642 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 BPIFA2Q96DR5 249 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 SENP5Q96HI0 755 aaPredicted RBP13.9□□□□□ -0.18
GPC3-202ENST00000394299 GUCD1Q96NT3 240 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 MND1Q9BWT6 205 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 HCAR1Q9BXC0 346 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 QPCTLQ9NXS2 382 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 FITM1A5D6W6 292 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 MYL12BO14950 172 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 PDGFBP01127 241 aaPredicted RBP13.9□□□□□ -0.18
GPC3-202ENST00000394299 TBXA2RP21731 343 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 ARL4DP49703 201 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 CDH11P55287 796 aa13.9□□□□□ -0.18
GPC3-202ENST00000394299 HSD17B7P56937 341 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms