RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 KANK2Q63ZY3 851 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 PPP4R4Q6NUP7 873 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 DNAJC14Q6Y2X3 702 aaPredicted RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 ZAR1Q86SH2 424 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 GABRG1Q8N1C3 465 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 NATD1Q8N6N6 113 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 COX18Q8N8Q8 333 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 PSMA8Q8TAA3 256 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 FAM120BQ96EK7 910 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 REXO5Q96IC2 774 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 TSSK3Q96PN8 268 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 TACO1Q9BSH4 297 aaKnown RBP15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 PIGUQ9H490 435 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 TUBB1Q9H4B7 451 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 ATP6V1HQ9UI12 483 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 DNAJC15Q9Y5T4 150 aa15.6■□□□□ 0.09
SNRPA1-202ENST00000394082 SMAD7O15105 426 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 AKAP10O43572 662 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 GCM2O75603 506 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 RPL38P63173 70 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 CAPRIN1Q14444 709 aaKnown RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 CD226Q15762 336 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 KLHL26Q53HC5 615 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 TMEM201Q5SNT2 666 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 GATSQ8NAP1 163 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 ZNF527Q8NB42 609 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 KIF18AQ8NI77 898 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 C16orf58Q96GQ5 468 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 NGBQ9NPG2 151 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 SIRT3Q9NTG7 399 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 FBXO34Q9NWN3 711 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 KLHL13Q9P2N7 655 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 PTGDR2Q9Y5Y4 395 aa15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 GPC6Q9Y625 555 aaPredicted RBP15.59■□□□□ 0.09
SNRPA1-202ENST00000394082 TMEM114B3SHH9 223 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 OVOL3O00110 214 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 COPEO14579 308 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 TRIM13O60858 407 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 PLAUP00749 431 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 HMGN2P05204 90 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 KRT16P08779 473 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 BCKDHAP12694 445 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 KRT4P19013 534 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 PCSK6P29122 969 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 P2RX1P51575 399 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 ATP5J2P56134 94 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 P2RY6Q15077 328 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 CDC73Q6P1J9 531 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 TFAP2EQ6VUC0 442 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 SSX8Q7RTT4 187 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 SZRD1Q7Z422 152 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 WFDC8Q8IUA0 241 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 SLC43A2Q8N370 569 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 CCDC63Q8NA47 563 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 HSD17B8Q92506 261 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 SH3YL1Q96HL8 342 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 GATA5Q9BWX5 397 aaPredicted RBP15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 ZCCHC3Q9NUD5 404 aaKnown RBP15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 MKS1Q9NXB0 559 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 BAIAP2L1Q9UHR4 511 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 ICAM5Q9UMF0 924 aa15.58■□□□□ 0.08
SNRPA1-202ENST00000394082 H3BNH8 94 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ETV2O00321 342 aaPredicted RBP15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 PRKD3O94806 890 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 NTN1O95631 604 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 LINC00032P0C843 101 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ATP6V1C1P21283 382 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 MAPK1P28482 360 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 HPCAL1P37235 193 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 RPS4XP62701 263 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ZNF117Q03924 483 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ZNF844Q08AG5 666 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 UGT3A2Q3SY77 523 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 SLC25A53Q5H9E4 307 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 SFRP5Q5T4F7 317 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 C10orf107Q8IVU9 208 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 FBXO30Q8TB52 745 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ABHD3Q8WU67 409 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 AKAP1Q92667 903 aaKnown RBP eCLIP15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 S100PBPQ96BU1 408 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 MRGPRX4Q96LA9 322 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ACTRT3Q9BYD9 372 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 ESRP2Q9H6T0 727 aaKnown RBP15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 TMEM185BQ9H7F4 350 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 RNF115Q9Y4L5 304 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 USF3Q68DE3 2245 aa15.57■□□□□ 0.08
SNRPA1-202ENST00000394082 INAFM1C9JVW0 142 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 NPIPB9F8W1W9 429 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 ZNF195O14628 629 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 SCAMP2O15127 329 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 EFNA2O43921 213 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 NPHS1O60500 1241 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 LYPLA1O75608 230 aaPredicted RBP15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 OPN1LWP04000 364 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 SHBGP04278 402 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 YES1P07947 543 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 FOXF1Q12946 379 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 LASP1Q14847 261 aaKnown RBP15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 PCLAFQ15004 111 aa15.56■□□□□ 0.08
SNRPA1-202ENST00000394082 NCMAPQ5T1S8 102 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms