RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 FAM46AQ96IP4 442 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SIGLEC11Q96RL6 698 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 LMF1Q96S06 567 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 UBQLN4Q9NRR5 601 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 FKBP14Q9NWM8 211 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 ERVK-18Q9QC07 812 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 PSORS1C1Q9UIG5 152 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC35A3Q9Y2D2 325 aa10.55□□□□□ -0.72
SMARCAL1-203ENST00000392128 CCDC160A6NGH7 325 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 RGS10O43665 173 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 STAT5AP42229 794 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 PSPHP78330 225 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CDK5Q00535 292 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 HLA-DQA1Q5Y7H0 255 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CASP12Q6UXS9 341 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 WDR88Q6ZMY6 472 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 PTCHD4Q6ZW05 846 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC29A4Q7RTT9 530 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRSS48Q7RTY5 328 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ANKRD37Q7Z713 158 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 POGLUT1Q8NBL1 392 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR13F1Q8NGS4 319 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 SNRNP27Q8WVK2 155 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ATOH1Q92858 354 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 GAL3ST4Q96RP7 486 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 YIPF3Q9GZM5 350 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 WWTR1Q9GZV5 400 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 SLC25A19Q9HC21 320 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 FBXO8Q9NRD0 319 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 RXFP3Q9NSD7 469 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CNIH4Q9P003 139 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 MEN1O00255 615 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CHP2O43745 196 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 PIP5K1CO60331 668 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ADAM11O75078 769 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ALOX12BO75342 701 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 SEC14L2O76054 403 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CSTAP01040 98 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 NAT1P18440 290 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ITIH1P19827 911 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 GIPRP48546 466 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 MC2RQ01718 297 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 TUBA3CQ13748 450 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 FNDC7Q5VTL7 733 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 GTF2IRD2BQ6EKJ0 949 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 GTF2IRD2Q86UP8 949 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF440Q8IYI8 595 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF441Q8N8Z8 693 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 FAM71CQ8NEG0 241 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM239Q8WW34 195 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CTRCQ99895 268 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 RHNO1Q9BSD3 238 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 SEMA4CQ9C0C4 833 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CCDC90BQ9GZT6 254 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CLN6Q9NWW5 311 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 FLRT3Q9NZU0 649 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 RSL24D1Q9UHA3 163 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF223Q9UK11 482 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 PPIEQ9UNP9 301 aaKnown RBP10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 R4GN57 208 aa10.54□□□□□ -0.72
SMARCAL1-203ENST00000392128 CLCA1A8K7I4 914 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 M0R129 80 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 GALR2O43603 387 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 PRKNO60260 465 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SMSP52788 366 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 EMX1Q04741 257 aaPredicted RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 GINS1Q14691 196 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 TMEM201Q5SNT2 666 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 FAAH2Q6GMR7 532 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MRPL14Q6P1L8 145 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 AHSA2Q719I0 299 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MRGPREQ86SM8 312 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MEX3DQ86XN8 651 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SVOPQ8N4V2 548 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 CLDN22Q8N7P3 220 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 WDR36Q8NI36 951 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 TEX47Q8TBZ9 253 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 METTL21AQ8WXB1 218 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MUL1Q969V5 352 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 HSPBAP1Q96EW2 488 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 HS6ST2Q96MM7 605 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 LRFN5Q96NI6 719 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SPSB2Q99619 263 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 ZNF426Q9BUY5 554 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 POLDIP3Q9BY77 421 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 PLA2G12AQ9BZM1 189 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 CFAP54Q96N23 3096 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 A0A1B0GWA3 101 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SAGE2PA6NJ88 616 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 SCDO00767 359 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 CNOT3O75175 753 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 UTS2O95399 124 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 MT-ND2P03891 347 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 TBXA2RP21731 343 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 CCKBRP32239 447 aa10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 RBM34P42696 430 aaKnown RBP10.53□□□□□ -0.72
SMARCAL1-203ENST00000392128 GPR4P46093 362 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms