RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 FGFBP1Q14512 234 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 SF3B4Q15427 424 aaKnown RBP eCLIP13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 EMC4Q5J8M3 183 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 PRAMEF8Q5VWM4 474 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 PRAMEF7Q5VXH5 474 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 REP15Q6BDI9 236 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMEM211Q6ICI0 200 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 RPTNQ6XPR3 784 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 C3P1Q6ZMU1 363 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 CMIPQ8IY22 773 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 PEX5LQ8IYB4 626 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMCO5AQ8N6Q1 288 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 SLC38A5Q8WUX1 472 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZBTB8AQ96BR9 441 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 ANKRD27Q96NW4 1050 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 RUBCNLQ9H714 662 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 KCNE5Q9UJ90 142 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
IGHV3-53-201ENST00000390627 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 LOC100653049A0A140TA62 436 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 AGAP5A6NIR3 686 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 AHRRA9YTQ3 701 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 FBP2O00757 339 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 MRASO14807 208 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 KRT34O76011 436 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 NPPAP01160 153 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 DBIP07108 87 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 IL7RP16871 459 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 RPS4Y1P22090 263 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 CCR4P51679 360 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 B3GALT5-AS1P59052 145 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 CBFBQ13951 182 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 MAPK14Q16539 360 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 PLPPR5Q32ZL2 321 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 DCST1Q5T197 706 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 C1orf185Q5T7R7 199 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 CBLN3Q6UW01 205 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARSKQ6UWY0 536 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 MTDHQ86UE4 582 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 ULK2Q8IYT8 1036 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 OR5W2Q8NH69 310 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 RP9Q8TA86 221 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 BBS10Q8TAM1 723 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 WDR60Q8WVS4 1066 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 WDYHV1Q96HA8 205 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 DMRTA2Q96SC8 542 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 TREX2Q9BQ50 279 aaPredicted RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 LAT2Q9GZY6 243 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 QRSL1Q9H0R6 528 aaKnown RBP13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 IKZF5Q9H5V7 419 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 MED17Q9NVC6 651 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 ALKBH4Q9NXW9 302 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 FAM53CQ9NYF3 392 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 STOML1Q9UBI4 398 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 ICAM5Q9UMF0 924 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 CAMK2AQ9UQM7 478 aa13.62□□□□□ -0.23
IGHV3-53-201ENST00000390627 OR2M5A3KFT3 312 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 C7orf72A4D263 438 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 WIPF3A6NGB9 483 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 H0Y3Z8 333 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 OIP5O43482 229 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 CYP7B1O75881 506 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 NUDT7P0C024 238 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARAFP10398 606 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 PEPDP12955 493 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 CPN1P15169 458 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 POU3F2P20265 443 aaPredicted RBP13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 PGM1P36871 562 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 EIF1P41567 113 aaKnown RBP13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 SMSP52788 366 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 MTPNP58546 118 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 KCNJ10P78508 379 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 SKP2Q13309 424 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 MAPK11Q15759 364 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 BCL2A1Q16548 175 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMEM44Q2T9K0 475 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 NDUFAF6Q330K2 333 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 LIN52Q52LA3 116 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 B3GNT6Q6ZMB0 384 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 GTPBP8Q8N3Z3 284 aaPredicted RBP13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 FAM71CQ8NEG0 241 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 MAL2Q969L2 176 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 ZG16BQ96DA0 208 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 ARSGQ96EG1 525 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 SH3GL1Q99961 368 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
IGHV3-53-201ENST00000390627 TMEM38AQ9H6F2 299 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms