RNA–Protein interactions for RNA: ENST00000389623.10

SSC5D-201, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSC5D, Length 4,845 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-201ENST00000389623 MAMDC2Q7Z304 686 aaPredicted RBP17.26■□□□□ 0.35
SSC5D-201ENST00000389623 ISG20Q96AZ6 181 aaKnown RBP17.26■□□□□ 0.35
SSC5D-201ENST00000389623 ELP4Q96EB1 424 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 MED30Q96HR3 178 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 CXCL16Q9H2A7 254 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 GABRQQ9UN88 632 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 SNX11Q9Y5W9 270 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 NPC1O15118 1278 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 RPS19P39019 145 aaKnown RBP17.26■□□□□ 0.35
SSC5D-201ENST00000389623 PCDHGA6Q9Y5G7 932 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 NUMBLQ9Y6R0 609 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 KRBOX1C9JBD0 128 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 LATO43561 262 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 SULT1C4O75897 302 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 CLEC2LP0C7M8 214 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 PLCXD2Q0VAA5 305 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 ARHGAP19Q14CB8 494 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 ALKAL2Q6UX46 152 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 ZNF619Q8N2I2 560 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 OR5H2Q8NGV7 314 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 KLF16Q9BXK1 252 aaPredicted RBP17.26■□□□□ 0.35
SSC5D-201ENST00000389623 LHX3Q9UBR4 397 aa17.26■□□□□ 0.35
SSC5D-201ENST00000389623 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 CD6P30203 668 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 INAVAQ3KP66 663 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 ENTPD8Q5MY95 495 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 MPP7Q5T2T1 576 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 LRIF1Q5T3J3 769 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 FIGLAQ6QHK4 219 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 RNF111Q6ZNA4 994 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 GDPD3Q7L5L3 318 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 ZNF546Q86UE3 836 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 DYNC2LI1Q8TCX1 351 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 CPEB1Q9BZB8 566 aaKnown RBP17.25■□□□□ 0.35
SSC5D-201ENST00000389623 IL21RQ9HBE5 538 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 ALX3O95076 343 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 PLGP00747 810 aaPredicted RBP17.25■□□□□ 0.35
SSC5D-201ENST00000389623 RAB40ALP0C0E4 278 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 PTPRRQ15256 657 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 TMEM156Q8N614 296 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 TCTEX1D2Q8WW35 142 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 RAB40AQ8WXH6 277 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 ZNF850A8MQ14 1090 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 OC90Q02509 493 aaPredicted RBP17.25■□□□□ 0.35
SSC5D-201ENST00000389623 SGCAQ16586 387 aa17.25■□□□□ 0.35
SSC5D-201ENST00000389623 NDRG4Q9ULP0 352 aaKnown RBP17.25■□□□□ 0.35
SSC5D-201ENST00000389623 FOXE1O00358 373 aaPredicted RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 CSO75390 466 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 CSNK1DP48730 415 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 OR6V1Q8N148 313 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 SFXN5Q8TD22 340 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 FYTTD1Q96QD9 318 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 MBOAT4Q96T53 435 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 SERTAD3Q9UJW9 196 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 COPS3Q9UNS2 423 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 SLC35A3Q9Y2D2 325 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 A0A1B0GV50 99 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 FAM227AF5H4B4 570 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 GPRIN2O60269 458 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 C1orf105O95561 183 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 UBBP0CG47 229 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 UBCP0CG48 685 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 CXADRP78310 365 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 VRK2Q86Y07 508 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 OR1J4Q8NGS1 313 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 PGAM5Q96HS1 289 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 ZNF582Q96NG8 517 aaPredicted RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 ZIC5Q96T25 663 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 MAN2C1Q9NTJ4 1040 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 MED17Q9NVC6 651 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 MEIS3P1A6NDR6 274 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 OR5K4A6NMS3 321 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 IFNA5P01569 189 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 TRA2BP62995 288 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 SOWAHCQ53LP3 525 aaPredicted RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 LIPIQ6XZB0 460 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 ZBED3Q96IU2 234 aaPredicted RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 SNRPBP14678 240 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 ZNF16P17020 682 aaPredicted RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 JUNDP17535 347 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 GALK2Q01415 458 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 EIF2S3LQ2VIR3 472 aaKnown RBP17.24■□□□□ 0.35
SSC5D-201ENST00000389623 FAM122CQ6P4D5 195 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 NUDT8Q8WV74 236 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 CDC6Q99741 560 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 CLEC2DQ9UHP7 191 aa17.24■□□□□ 0.35
SSC5D-201ENST00000389623 TNFRSF10AO00220 468 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 GAPDHSO14556 408 aaPredicted RBP17.23■□□□□ 0.35
SSC5D-201ENST00000389623 AGPAT2O15120 278 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 RAD1O60671 282 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 TCRBP04435 133 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 TPT1P13693 172 aaKnown RBP17.23■□□□□ 0.35
SSC5D-201ENST00000389623 MAOAP21397 527 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 SLX4IPQ5VYV7 408 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 FCRLAQ7L513 359 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 PITHD1Q9GZP4 211 aaPredicted RBP17.23■□□□□ 0.35
SSC5D-201ENST00000389623 B3GAT2Q9NPZ5 323 aa17.23■□□□□ 0.35
SSC5D-201ENST00000389623 RGPD5Q99666 1765 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms