RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 TAS2R38P59533 333 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 ESCO2Q56NI9 601 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 PIP5KL1Q5T9C9 394 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 PRPF38BQ5VTL8 546 aaKnown RBP17.66■□□□□ 0.42
CSPG5-202ENST00000383738 LRRN1Q6UXK5 716 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 TMEM64Q6YI46 380 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 TECPR1Q7Z6L1 1165 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 SYNPOQ8N3V7 929 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 OR4C6Q8NH72 309 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 OR4K3Q96R72 315 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 PCDHGB2Q9Y5G2 931 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 PCDHGA2Q9Y5H1 932 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 CDC40O60508 579 aaKnown RBP eCLIP17.66■□□□□ 0.42
CSPG5-202ENST00000383738 HEXBP07686 556 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 H2AFB2P0C5Z0 115 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 HK1P19367 917 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 XCR1P46094 333 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 CEBPGP53567 150 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 OR52E4Q8NGH9 312 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 DNAJA4Q8WW22 397 aaPredicted RBP17.66■□□□□ 0.42
CSPG5-202ENST00000383738 ECHDC3Q96DC8 303 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 RANBP3Q9H6Z4 567 aaPredicted RBP17.66■□□□□ 0.42
CSPG5-202ENST00000383738 MED11Q9P086 117 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 PLCL2Q9UPR0 1127 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 SNX11Q9Y5W9 270 aa17.66■□□□□ 0.42
CSPG5-202ENST00000383738 TRBV4-1A0A0J9YWV2 114 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SYPP08247 313 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 HIST1H1TP22492 207 aaPredicted RBP17.65■□□□□ 0.42
CSPG5-202ENST00000383738 GRK5P34947 590 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 CCINQ13939 588 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 LTB4RQ15722 352 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SYPL1Q16563 259 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 GFOD2Q3B7J2 385 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 AGBL4Q5VU57 503 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SLC27A4Q6P1M0 643 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SLC29A4Q7RTT9 530 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 MMP17Q9ULZ9 603 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SLC5A10A0PJK1 596 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 M0R082 166 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 PSMD9O00233 223 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 UPK1AO00322 258 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 MT-ND4P03905 459 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 MNDAP41218 407 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 XKR7Q5GH72 579 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 LCTLQ6UWM7 567 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 GALNT7Q86SF2 657 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 MGAT4BQ9UQ53 548 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 LRRTM2O43300 516 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 PEPDP12955 493 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 IL9P15248 144 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 TMEM92Q6UXU6 159 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 IL22RA1Q8N6P7 574 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 CYB561A3Q8NBI2 242 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 RCBTB1Q8NDN9 531 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 OR5T3Q8NGG3 340 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SETD6Q8TBK2 473 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 C16orf58Q96GQ5 468 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 TXNL4BQ9NX01 149 aaKnown RBP17.65■□□□□ 0.42
CSPG5-202ENST00000383738 NDRG4Q9ULP0 352 aaKnown RBP17.65■□□□□ 0.42
CSPG5-202ENST00000383738 CISD3P0C7P0 127 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 GKN3PP0CG01 181 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 GRK6P43250 576 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SRP9P49458 86 aaKnown RBP17.65■□□□□ 0.42
CSPG5-202ENST00000383738 KCNAB1Q14722 419 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 OR2L3Q8NG85 312 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 THAP7Q9BT49 309 aaPredicted RBP17.65■□□□□ 0.42
CSPG5-202ENST00000383738 SLC39A1Q9NY26 324 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 MBD2Q9UBB5 411 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 PPT2Q9UMR5 302 aa17.65■□□□□ 0.42
CSPG5-202ENST00000383738 POLEQ07864 2286 aa17.64■□□□□ 0.42
CSPG5-202ENST00000383738 B4DXG7 233 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 SCDO00767 359 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 XKRYO14609 159 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 ZNF821O75541 412 aaPredicted RBP17.64■□□□□ 0.41
CSPG5-202ENST00000383738 PTPN6P29350 595 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 SMAD2Q15796 467 aaKnown RBP17.64■□□□□ 0.41
CSPG5-202ENST00000383738 TMEM164Q5U3C3 297 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 FAM111BQ6SJ93 734 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 UBE2Q1Q7Z7E8 422 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 SLITRK4Q8IW52 837 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 OR2L5Q8NG80 312 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 FBRSQ9HAH7 460 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 B8ZZF3 427 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 C11orf98E9PRG8 122 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 GPR37L1O60883 481 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 PAHP00439 452 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 COL9A1P20849 921 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 IFITM2Q01629 132 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 CDKL4Q5MAI5 379 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 METRNLQ641Q3 311 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 PLXDC1Q8IUK5 500 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 FOXRED2Q8IWF2 684 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 FAM46AQ96IP4 442 aaKnown RBP17.64■□□□□ 0.41
CSPG5-202ENST00000383738 LYSMD1Q96S90 227 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 OR51J1Q9H342 316 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 METTL17Q9H7H0 456 aaPredicted RBP17.64■□□□□ 0.41
CSPG5-202ENST00000383738 ELL3Q9HB65 397 aaPredicted RBP17.64■□□□□ 0.41
CSPG5-202ENST00000383738 FOLH1BQ9HBA9 442 aa17.64■□□□□ 0.41
CSPG5-202ENST00000383738 EMC8O43402 210 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms