RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 OSTF1Q92882 214 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 FAM120BQ96EK7 910 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 OTUB1Q96FW1 271 aaPredicted RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 C16orf58Q96GQ5 468 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 REXO5Q96IC2 774 aaKnown RBP23.62■■□□□ 1.37
NPHP3-202ENST00000383282 KLHL15Q96M94 604 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 NPAS1Q99742 590 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 OR10A4Q9H209 315 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 GPR52Q9Y2T5 361 aa23.62■■□□□ 1.37
NPHP3-202ENST00000383282 TMEM114B3SHH9 223 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 KLF4O43474 513 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 ATP6V1C1P21283 382 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 MAPK1P28482 360 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 HPCAL1P37235 193 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 RPL3P39023 403 aaKnown RBP23.61■■□□□ 1.37
NPHP3-202ENST00000383282 MLC1Q15049 377 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 CROCCP2Q86T23 111 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 ZNF527Q8NB42 609 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 STACQ99469 402 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 TMEM109Q9BVC6 243 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 BTBD2Q9BX70 525 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 ACTR6Q9GZN1 396 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 TIGARQ9NQ88 270 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 DUSP22Q9NRW4 184 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 FBXO34Q9NWN3 711 aa23.61■■□□□ 1.37
NPHP3-202ENST00000383282 BCKDHAP12694 445 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 EFNA1P20827 205 aaPredicted RBP23.6■■□□□ 1.37
NPHP3-202ENST00000383282 ELK4P28324 431 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 PTH2RP49190 550 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 CARD18P57730 90 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 LASP1Q14847 261 aaKnown RBP23.6■■□□□ 1.37
NPHP3-202ENST00000383282 CD226Q15762 336 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 CEP85LQ5SZL2 805 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 MTERF4Q7Z6M4 381 aaKnown RBP23.6■■□□□ 1.37
NPHP3-202ENST00000383282 WFDC8Q8IUA0 241 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 LILRA2Q8N149 483 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 POC1BQ8TC44 478 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 PHOSPHO1Q8TCT1 267 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 TWIST2Q8WVJ9 160 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 ZIM3Q96PE6 472 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 CXorf56Q9H5V9 222 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 C12orf49Q9H741 205 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 GIN1Q9NXP7 522 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 LGALS13Q9UHV8 139 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 SNX8Q9Y5X2 465 aa23.6■■□□□ 1.37
NPHP3-202ENST00000383282 TMCC2O75069 709 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 NUDT14O95848 222 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 HMGN2P05204 90 aaKnown RBP23.59■■□□□ 1.37
NPHP3-202ENST00000383282 PSMB1P20618 241 aaKnown RBP23.59■■□□□ 1.37
NPHP3-202ENST00000383282 AGTR1P30556 359 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 SFTPDP35247 375 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 ZNF844Q08AG5 666 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 CDS1Q92903 461 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 CPNE4Q96A23 557 aaPredicted RBP23.59■■□□□ 1.37
NPHP3-202ENST00000383282 PLPPR2Q96GM1 343 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 PPP3R2Q96LZ3 170 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 HOXD1Q9GZZ0 328 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 PIGUQ9H490 435 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 EML4Q9HC35 981 aaKnown RBP23.59■■□□□ 1.37
NPHP3-202ENST00000383282 ATP6V1HQ9UI12 483 aa23.59■■□□□ 1.37
NPHP3-202ENST00000383282 TRIM64A6NGJ6 449 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 TRIM64BA6NI03 449 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 GJE1A6NN92 205 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 H3BNH8 94 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 SCAMP2O15127 329 aaKnown RBP23.58■■□□□ 1.37
NPHP3-202ENST00000383282 RGS16O15492 202 aaPredicted RBP23.58■■□□□ 1.37
NPHP3-202ENST00000383282 FGF4P08620 206 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 LINGO3P0C6S8 592 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 FOXF1Q12946 379 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 EXOSC6Q5RKV6 272 aaKnown RBP23.58■■□□□ 1.37
NPHP3-202ENST00000383282 TMEM201Q5SNT2 666 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 STEAP2Q8NFT2 490 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 TACO1Q9BSH4 297 aaKnown RBP23.58■■□□□ 1.37
NPHP3-202ENST00000383282 CENPHQ9H3R5 247 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 SIRT3Q9NTG7 399 aaPredicted RBP23.58■■□□□ 1.37
NPHP3-202ENST00000383282 TRAF6Q9Y4K3 522 aa23.58■■□□□ 1.37
NPHP3-202ENST00000383282 DSCAMO60469 2012 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 PIP5K1BO14986 540 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 NPHS1O60500 1241 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 SOX30O94993 753 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 CNOT4O95628 575 aaKnown RBP23.57■■□□□ 1.36
NPHP3-202ENST00000383282 KRT16P08779 473 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ADH6P28332 368 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ZNF117Q03924 483 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 RNPS1Q15287 305 aaKnown RBP23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ZNF239Q16600 458 aaKnown RBP23.57■■□□□ 1.36
NPHP3-202ENST00000383282 CDC73Q6P1J9 531 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 OR7A2PQ8NGA2 310 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 OR56A1Q8NGH5 318 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ADAMTS15Q8TE58 950 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ROBO4Q8WZ75 1007 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 HDHD5Q9BXW7 423 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 ATAD3AQ9NVI7 634 aa23.57■■□□□ 1.36
NPHP3-202ENST00000383282 FAF1Q9UNN5 650 aaPredicted RBP23.57■■□□□ 1.36
NPHP3-202ENST00000383282 HS3ST1O14792 307 aa23.56■■□□□ 1.36
NPHP3-202ENST00000383282 CHRNGP07510 517 aa23.56■■□□□ 1.36
NPHP3-202ENST00000383282 P2RX1P51575 399 aa23.56■■□□□ 1.36
NPHP3-202ENST00000383282 SUMO3P55854 103 aaPredicted RBP23.56■■□□□ 1.36
NPHP3-202ENST00000383282 NATD1Q8N6N6 113 aa23.56■■□□□ 1.36
NPHP3-202ENST00000383282 ZNF611Q8N823 705 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms