RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CT45A2Q5DJT8 189 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CT45A1Q5HYN5 189 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CTRB2Q6GPI1 263 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 OR52E8Q6IFG1 317 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CNKSR3Q6P9H4 555 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SHISA6Q6ZSJ9 500 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CTU1Q7Z7A3 348 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 NOXA1Q86UR1 476 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 IRF2BP1Q8IU81 584 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PLXDC1Q8IUK5 500 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 GDPD1Q8N9F7 314 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 TMEM104Q8NE00 496 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CT45A3Q8NHU0 189 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 HUS1BQ8NHY5 278 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PRRC1Q96M27 445 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CHRDQ9H2X0 955 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SMOC2Q9H3U7 446 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 MVB12BQ9H7P6 319 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZDHHC7Q9NXF8 308 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZNF230Q9UIE0 474 aaPredicted RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 POLHQ9Y253 713 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PREX2Q70Z35 1606 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SCAMP2O15127 329 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 JRKO75564 520 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PBX1P40424 430 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZNF33AQ06730 810 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 GALEQ14376 348 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZNF74Q16587 644 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 LPAL2Q16609 132 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PKDCCQ504Y2 493 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 C9orf152Q5JTZ5 239 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 NXPE4Q6UWF7 544 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SBSNQ6UWP8 590 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 MKXQ8IYA7 352 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ADGRF3Q8IZF5 1079 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CMTM2Q8TAZ6 248 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZFAND1Q8TCF1 268 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CNIH4Q9P003 139 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PISDQ9UG56 409 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SERTM2A0A1B0GWG4 89 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 A0A1W2PQU0 124 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 C17orf112F2Z3M2 114 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 AQP7O14520 342 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ACPPP15309 386 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 TACR3P29371 465 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 HES1Q14469 280 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 DESI1Q6ICB0 168 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 GPR148Q8TDV2 347 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 TRUB1Q8WWH5 349 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 MOCOSQ96EN8 888 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PRRT1Q99946 306 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZMAT5Q9UDW3 170 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 IER3IP1Q9Y5U9 82 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 LOC102725191A0A1B0GVB3 256 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PRAMEF2O60811 474 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PPP1R11O60927 126 aaPredicted RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 PIGRP01833 764 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 CFHP08603 1231 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 GSTP1P09211 210 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 UBBP0CG47 229 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 UBCP0CG48 685 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 SLC35A2P78381 396 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 PLAC9Q5JTB6 97 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 FAM185AQ8N0U4 392 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 SPARTQ8N0X7 666 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 DCAF4L2Q8NA75 395 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 KDM1BQ8NB78 822 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 OR9Q2Q8NGE9 314 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 OR4A16Q8NH70 328 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 FNDC8Q8TC99 324 aa5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZNF845Q96IR2 970 aaPredicted RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 THAP7Q9BT49 309 aaPredicted RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 MCTS1Q9ULC4 181 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 ZCCHC11Q5TAX3 1644 aaKnown RBP5.54□□□□□ -1.52
RFX3-204ENST00000382004 SULT2B1O00204 365 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 LATO43561 262 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ADAMTS4O75173 837 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 AK1P00568 194 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 HLA-AP01891 365 aaKnown RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 CSNK1A1P48729 337 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 PPT1P50897 306 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 TAF9Q16594 264 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 CLECL1Q8IZS7 167 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 CHFRQ96EP1 664 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 LHPPQ9H008 270 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 SLC39A9Q9NUM3 307 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 TMEM248Q9NWD8 314 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 TRAPPC2LQ9UL33 140 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 SLC6A14Q9UN76 642 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ASB4Q9Y574 426 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ABCA6Q8N139 1617 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 A0A0B4J2A0 478 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 TOR1AO14656 332 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 SRPX2O60687 465 aaPredicted RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 PRAMEF11O60813 436 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 USP2O75604 605 aaPredicted RBP5.53□□□□□ -1.52
RFX3-204ENST00000382004 GIFP27352 417 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 SNCAP37840 140 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 ETV4P43268 484 aa5.53□□□□□ -1.52
RFX3-204ENST00000382004 EMP3P54852 163 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms