RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 LILRB5O75023 590 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 RGS9O75916 674 aaPredicted RBP12.93□□□□□ -0.34
SDC1-202ENST00000381150 PYCR1P32322 319 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 RFX3P48380 749 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 DUSP6Q16828 381 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 TMEM88Q6PEY1 159 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 NHLRC1Q6VVB1 395 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 CYB561A3Q8NBI2 242 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 VN1R2Q8NFZ6 395 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 RFKQ969G6 155 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 ALG8Q9BVK2 526 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 BTBD1Q9H0C5 482 aa12.93□□□□□ -0.34
SDC1-202ENST00000381150 SLC22A23A1A5C7 686 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 E9PI62 339 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 RNF13O43567 381 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 GMDSO60547 372 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ANXA7P20073 488 aaKnown RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 BTCP35070 178 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 AKR1C2P52895 323 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ZNF273Q14593 569 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 TCEA2Q15560 299 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 GRASPQ7Z6J2 395 aaPredicted RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 SIRT6Q8N6T7 355 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 OR51L1Q8NGJ5 315 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 OR2T4Q8NH00 348 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ZNF480Q8WV37 535 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 RSPRY1Q96DX4 576 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 WASH6PQ9NQA3 447 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 CYSLTR2Q9NS75 346 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 KCMF1Q9P0J7 381 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 MLXQ9UH92 298 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 TCF20Q9UGU0 1960 aaKnown RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 CEBPBP17676 345 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 HK1P19367 917 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 HTR4Q13639 388 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 MINDY4Q4G0A6 757 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ING5Q8WYH8 240 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 SAMD8Q96LT4 415 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
SDC1-202ENST00000381150 DMRT3Q9NQL9 472 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 HPF1Q9NWY4 346 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 KCNMB2Q9Y691 235 aa12.92□□□□□ -0.34
SDC1-202ENST00000381150 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 ANXA2P2A6NMY6 339 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 A8MVJ9 347 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 ATG13O75143 517 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 UBXN7O94888 489 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 RAD52P43351 418 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 KCNJ5P48544 419 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 E2F1Q01094 437 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 PYHIN1Q6K0P9 492 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 OAFQ86UD1 273 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 NRMQ8IXM6 262 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 OR52B4Q8NGK2 314 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 PDXPQ96GD0 296 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 WDR26Q9H7D7 661 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 BRF2Q9HAW0 419 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 A0A1B0GVI7 797 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 HMGN4O00479 90 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 SOX30O94993 753 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 MAPK9P45984 424 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 GCGRP47871 477 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 SIM1P81133 766 aaPredicted RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZNF750Q32MQ0 723 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 FAM74A1Q5RGS3 127 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZNF322Q6U7Q0 402 aaPredicted RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 NRSN1Q8IZ57 195 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 OR52H1Q8NGJ2 320 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZG16BQ96DA0 208 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 GAL3ST1Q99999 423 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 SOSTQ9BQB4 213 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 SEMA4CQ9C0C4 833 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 EPHX3Q9H6B9 360 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 CAPN10Q9HC96 672 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 KCND3Q9UK17 655 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 KIAA1549LQ6ZVL6 1849 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 MUC22E2RYF6 1773 aaPredicted RBP12.91□□□□□ -0.34
SDC1-202ENST00000381150 LRRN3E7EW58 273 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 FGBP02675 491 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ELFN1P0C7U0 828 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 GDNFP39905 211 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 ZP1P60852 638 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 AKIRIN2Q53H80 203 aa12.91□□□□□ -0.34
SDC1-202ENST00000381150 PLA2G15Q8NCC3 412 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms