RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 IL21RQ9HBE5 538 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CLDND1Q9NY35 253 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 MAT2BQ9NZL9 334 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CLEC1BQ9P126 229 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 SCML1Q9UN30 329 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 LRP4O75096 1905 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 SPTBP11277 2137 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 GON4LQ3T8J9 2241 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 C12orf71A8MTZ7 269 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 J3QRE1 110 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 BHLHE40O14503 412 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 CSF2P04141 144 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 DBIP07108 87 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 GABRA3P34903 492 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 EXOSC6Q5RKV6 272 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 GATAD2AQ86YP4 633 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 RAB43Q86YS6 212 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 TMEM99Q8N816 258 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 TOR1AIP2Q8NFQ8 470 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 OR13C2Q8NGS9 318 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 BRIX1Q8TDN6 353 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 AP3S1Q92572 193 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 EFHD2Q96C19 240 aaPredicted RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 CD180Q99467 661 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 FBRSQ9HAH7 460 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 NEK6Q9HC98 313 aa18.6■□□□□ 0.57
EBF1-202ENST00000380654 NDRG2Q9UN36 371 aaKnown RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 SIRT4Q9Y6E7 314 aaPredicted RBP18.6■□□□□ 0.57
EBF1-202ENST00000380654 SGK494L7N484 410 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 ZNF10P21506 573 aaPredicted RBP18.59■□□□□ 0.57
EBF1-202ENST00000380654 CSTF1Q05048 431 aaKnown RBP18.59■□□□□ 0.57
EBF1-202ENST00000380654 MGAT2Q10469 447 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 P2RY14Q15391 338 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 ZNF544Q6NX49 715 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 NIPAL3Q6P499 406 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 TMEM91Q6ZNR0 172 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 Q6ZSR6 202 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 SCAIQ8N9R8 606 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 OR52N1Q8NH53 320 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 GRHL3Q8TE85 626 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 SENP5Q96HI0 755 aaPredicted RBP18.59■□□□□ 0.57
EBF1-202ENST00000380654 HS6ST2Q96MM7 605 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 TIMP4Q99727 224 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 CTRCQ99895 268 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 ATF6BQ99941 703 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 S1PR5Q9H228 398 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 LYRM4Q9HD34 91 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 HRASLS2Q9NWW9 162 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 CPNE7Q9UBL6 633 aa18.59■□□□□ 0.57
EBF1-202ENST00000380654 HRO43593 1189 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 RFPL3O75679 317 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 GPR75O95800 540 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 HLA-DPB1P04440 258 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 HOXD12P35452 270 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 ASAH1Q13510 395 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 TMEM44Q2T9K0 475 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 KLHL12Q53G59 568 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 ATAD3CQ5T2N8 411 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 CNIH2Q6PI25 160 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 CDRT4Q8N9R6 151 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 BAHD1Q8TBE0 780 aaPredicted RBP18.58■□□□□ 0.57
EBF1-202ENST00000380654 SMAP2Q8WU79 429 aaPredicted RBP18.58■□□□□ 0.57
EBF1-202ENST00000380654 CAPSLQ8WWF8 208 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 KRCC1Q9NPI7 259 aaPredicted RBP18.58■□□□□ 0.57
EBF1-202ENST00000380654 DUSP22Q9NRW4 184 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 GRIP1Q9Y3R0 1128 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 BRWD1Q9NSI6 2320 aa18.58■□□□□ 0.57
EBF1-202ENST00000380654 TRAV27A0A087WT01 109 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 PLA2G10O15496 165 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 PLOD3O60568 738 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 REM1O75628 298 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 VSX2P58304 361 aaPredicted RBP18.58■□□□□ 0.56
EBF1-202ENST00000380654 IFITM2Q01629 132 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.58■□□□□ 0.56
EBF1-202ENST00000380654 DEFB110Q30KQ9 67 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 SLC22A18ASQ8N1D0 253 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 ZNF614Q8N883 585 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 GDPD1Q8N9F7 314 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 OR13H1Q8NG92 308 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 OR52L1Q8NGH7 329 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 DNAJA4Q8WW22 397 aaPredicted RBP18.58■□□□□ 0.56
EBF1-202ENST00000380654 MRPL38Q96DV4 380 aaKnown RBP18.58■□□□□ 0.56
EBF1-202ENST00000380654 RBCK1Q9BYM8 510 aa18.58■□□□□ 0.56
EBF1-202ENST00000380654 LAMA1P25391 3075 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 MEIOCA2RUB1 952 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 CHST10O43529 356 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 HYAL3O43820 417 aaPredicted RBP18.57■□□□□ 0.56
EBF1-202ENST00000380654 CLUP10909 449 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 PAICSP22234 425 aaKnown RBP18.57■□□□□ 0.56
EBF1-202ENST00000380654 ACSM1Q08AH1 577 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 TMEM53Q6P2H8 277 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 CA13Q8N1Q1 262 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 RPLP0P6Q8NHW5 317 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 BPIFA2Q96DR5 249 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 ZNF486Q96H40 463 aaPredicted RBP18.57■□□□□ 0.56
EBF1-202ENST00000380654 GAS2L1Q99501 681 aaPredicted RBP18.57■□□□□ 0.56
EBF1-202ENST00000380654 SLC22A4Q9H015 551 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 RNF32Q9H0A6 362 aa18.57■□□□□ 0.56
EBF1-202ENST00000380654 MEPEQ9NQ76 525 aaPredicted RBP18.57■□□□□ 0.56
EBF1-202ENST00000380654 USP36Q9P275 1121 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms