RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 GABRR2P28476 465 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 MAXP61244 160 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PPIAP62937 165 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SRSF3P84103 164 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 VLDLRP98155 873 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 HNF4GQ14541 408 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 C9orf64Q5T6V5 341 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 RIPPLY2Q5TAB7 128 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 C18orf63Q68DL7 685 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 LANCL3Q6ZV70 420 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 OR2W3Q7Z3T1 314 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 C1orf52Q8N6N3 182 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 FBXO15Q8NCQ5 510 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 OR56B2PQ8NGI1 322 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SNHG12Q9BXW3 62 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PBX4Q9BYU1 374 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SAMD4AQ9UPU9 718 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ASF1AQ9Y294 204 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 KCTD3Q9Y597 815 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SNX10Q9Y5X0 201 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 A0A1W2PPC1 479 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SNAI1O95863 264 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 AK1P00568 194 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 TXNP10599 105 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 RAB5AP20339 215 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 TACR3P29371 465 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 NOS2P35228 1153 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 RPS25P62851 125 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SLC5A12Q1EHB4 618 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 MPPE1Q53F39 396 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF549Q6P9A3 640 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PAQR6Q6TCH4 344 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 MPZL3Q6UWV2 235 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PTCHD4Q6ZW05 846 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 DPPA4Q7L190 304 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 TECPR1Q7Z6L1 1165 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 BEND2Q8NDZ0 799 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PXYLP1Q8TE99 480 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ING5Q8WYH8 240 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 NSUN5Q96P11 429 aaKnown RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 FEVQ99581 238 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 MANSC4A6NHS7 340 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 A6NNC1 897 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ACTL6AO96019 429 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 CTSHP09668 335 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 MPGP29372 298 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 THBS4P35443 961 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 SLC1A2P43004 574 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 GLP1RP43220 463 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 CDC42P60953 191 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF789Q5FWF6 425 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 VTCN1Q7Z7D3 282 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 LAPTM4BQ86VI4 370 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ZNF619Q8N2I2 560 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 PTGR2Q8N8N7 351 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 ISOC2Q96AB3 205 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 CLUHP3Q96NS8 147 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 FCRL5Q96RD9 977 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 RPS10P5Q9NQ39 176 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
PTPRA-204ENST00000380393 LANCL2Q9NS86 450 aa8.76□□□□□ -1.01
PTPRA-204ENST00000380393 CHST10O43529 356 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SLC28A2O43868 658 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 MOSPD3O75425 235 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 EPB42P16452 691 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 GDNFP39905 211 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 EPHB3P54753 998 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CNTN1Q12860 1018 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 KCNA10Q16322 511 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FAM110CQ1W6H9 321 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 NSUN5P2Q63ZY6 315 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SPICQ8N5J4 248 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 OR51S1Q8NGJ8 323 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PIH1D2Q8WWB5 315 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 KHSRPQ92945 711 aaKnown RBP eCLIP8.75□□□□□ -1.011e-7■■■■□ 24.1
PTPRA-204ENST00000380393 MGME1Q9BQP7 344 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 C11orf84Q9BUA3 381 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 LAT2Q9GZY6 243 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 OR10A4Q9H209 315 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 RNF24Q9Y225 148 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 A0A1W2PPH5 198 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 OR2M5A3KFT3 312 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 HAS3O00219 553 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CA11O75493 328 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CLTBP09497 229 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 BMP7P18075 431 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CSNK1DP48730 415 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 VEGFBP49765 207 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 EFNA5P52803 228 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SOX8P57073 446 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 CD81P60033 236 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 TPI1P60174 286 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 INSM1Q01101 510 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PTGR1Q14914 329 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 PDZD11Q5EBL8 140 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 ARSJQ5FYB0 599 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 SFRP4Q6FHJ7 346 aaPredicted RBP8.75□□□□□ -1.01
PTPRA-204ENST00000380393 FIGNL1Q6PIW4 674 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 C17orf99Q6UX52 265 aa8.75□□□□□ -1.01
PTPRA-204ENST00000380393 VRK3Q8IV63 474 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms