RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 SYNPOQ8N3V7 929 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RYBPQ8N488 228 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 C15orf54Q8N8G6 183 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF689Q96CS4 500 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 IGSF21Q96ID5 467 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TRIB3Q96RU7 358 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 MESP1Q9BRJ9 268 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 FXYD6Q9H0Q3 95 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CYSLTR2Q9NS75 346 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 WWOXQ9NZC7 414 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 UROSP10746 265 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TYRP14679 529 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 NME1P15531 152 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CD1DP15813 335 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ACHEP22303 614 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 AKT1P31749 480 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PNLIPRP2P54317 469 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CDC42P60953 191 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SLC14A1Q13336 389 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 C1DQ13901 141 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PTGR1Q14914 329 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PTGES3Q15185 160 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 INPP5JQ15735 1006 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 KRBOX4Q5JUW0 171 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SLC39A5Q6ZMH5 540 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF227Q86WZ6 799 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TOMM5Q8N4H5 51 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF614Q8N883 585 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 OR10G2Q8NGC3 310 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SCAMP5Q8TAC9 235 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RHEBL1Q8TAI7 183 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SP7Q8TDD2 431 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 OSTF1Q92882 214 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ADGRE3Q9BY15 652 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PDFQ9HBH1 243 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 MYOZ1Q9NP98 299 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 FZD3Q9NPG1 666 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ISYNA1Q9NPH2 558 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ANKRD36A6QL64 1941 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM72A0PK05 275 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 C2orf78A6NCI8 922 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 A6NCN8 305 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TLR5O60602 858 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 GUCA1CO95843 209 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 EIF4EP06730 217 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ANXA8P13928 327 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 BDKRB2P30411 391 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 MPIP34949 423 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RAB5CP51148 216 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 EPHB3P54753 998 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 WNT3AP56704 352 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TAF10Q12962 218 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 PPIGQ13427 754 aaKnown RBP eCLIP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 GAB1Q13480 694 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 DOC2AQ14183 400 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 RBM39Q14498 530 aaKnown RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF235Q14590 738 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SPANXN4Q5MJ08 99 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ATPAF1Q5TC12 328 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 ANXA8L1Q5VT79 327 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 KIAA1211LQ6NV74 962 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 VITQ6UXI7 678 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM130Q8N3G9 435 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 HJURPQ8NCD3 748 aaPredicted RBP6.99□□□□□ -1.29
CDKL5-201ENST00000379989 C7orf34Q96L11 122 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SLC6A18Q96N87 628 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 IL4I1Q96RQ9 567 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 TEAD3Q99594 435 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 CHST5Q9GZS9 411 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 OR51B6Q9H340 312 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 SPG21Q9NZD8 308 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 COX16Q9P0S2 106 aa6.99□□□□□ -1.29
CDKL5-201ENST00000379989 A8MVJ9 347 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ACTL6AO96019 429 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 HLA-DQB2P05538 268 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CD2P06729 351 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ANXA2P07355 339 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CD3GP09693 182 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF25P17030 456 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 FGF9P31371 208 aaPredicted RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 HCCSP53701 268 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 RNASE12Q5GAN4 147 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 SDHAF4Q5VUM1 108 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 TMEM71Q6P5X7 295 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 TMPRSS11FQ6ZWK6 438 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 RABEPKQ7Z6M1 372 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 SLITRK4Q8IW52 837 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 SLC39A11Q8N1S5 342 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 OR11G2Q8NGC1 345 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 HASPINQ8TF76 798 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 PIH1D2Q8WWB5 315 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 NDRG1Q92597 394 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 ZNF354BQ96LW1 612 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 CLCC1Q96S66 551 aa6.98□□□□□ -1.29
CDKL5-201ENST00000379989 SARS2Q9NP81 518 aaKnown RBP6.98□□□□□ -1.29
CDKL5-201ENST00000379989 TBX21Q9UL17 535 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms