RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 C11orf24Q96F05 449 aaPredicted RBP15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CACNG6Q9BXT2 260 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 LRTM1Q9HBL6 345 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 TIGARQ9NQ88 270 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 FAIMQ9NVQ4 179 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 CDC42EP3Q9UKI2 254 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 B3GALT5Q9Y2C3 310 aa15.78■□□□□ 0.12
PDLIM4-202ENST00000379018 C7orf72A4D263 438 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 SCDO00767 359 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 ABCD4O14678 606 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 CRCPO75575 148 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 F12P00748 615 aaPredicted RBP15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 PKNOX1P55347 436 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 ITGADQ13349 1161 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 PPA1Q15181 289 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 TMEM249Q2WGJ8 235 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 TMEM176BQ3YBM2 270 aaPredicted RBP15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 CLEC2AQ6UVW9 174 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 DNM1P46Q6ZS02 220 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 TRABD2AQ86V40 505 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 PIAS4Q8N2W9 510 aaPredicted RBP15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 NUP43Q8NFH3 380 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 MANSC1Q9H8J5 431 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 PRSS50Q9UI38 385 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 STK38LQ9Y2H1 464 aa15.77■□□□□ 0.12
PDLIM4-202ENST00000379018 TTC36A6NLP5 189 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 SHISA9B4DS77 424 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 AKAP10O43572 662 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 KCNK2O95069 426 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 NKX2-2O95096 273 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 ZNF16P17020 682 aaPredicted RBP15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 EFNA1P20827 205 aaPredicted RBP15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 IMPDH1P20839 514 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 ATP5F1P24539 256 aaPredicted RBP15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 CASP9P55211 416 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 IRX1P78414 480 aaPredicted RBP15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 NRF1Q16656 503 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 SEZ6L2Q6UXD5 910 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 COX18Q8N8Q8 333 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 CDRT4Q8N9R6 151 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 SLC16A11Q8NCK7 471 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 FBXO27Q8NI29 283 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 PHOSPHO1Q8TCT1 267 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 ACTRT2Q8TDY3 377 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 EGLN2Q96KS0 407 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 ADAD1Q96M93 576 aaKnown RBP15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 AMBRA1Q9C0C7 1298 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 GIN1Q9NXP7 522 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 TAS2R7Q9NYW3 318 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 POU2F3Q9UKI9 436 aa15.76■□□□□ 0.11
PDLIM4-202ENST00000379018 NPIPA5A0A0B4J1W7 369 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 ZNF814B7Z6K7 855 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 NPIPA7E9PJI5 369 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 GOLGA8RI6L899 631 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 PRKD3O94806 890 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 YES1P07947 543 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 THBS1P07996 1170 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 SNRPAP09012 282 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 NPIPA8P0DM63 369 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 ENPP1P22413 925 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 MANFP55145 182 aaKnown RBP15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 ZNF117Q03924 483 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 P2RY6Q15077 328 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 DUSP5Q16690 384 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 AGAP6Q5VW22 663 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 NOXRED1Q6NXP6 359 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 DTX2Q86UW9 622 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 CEP70Q8NHQ1 597 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 RFWD2Q8NHY2 731 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.75■□□□□ 0.119e-16■■■■■ 46.4
PDLIM4-202ENST00000379018 MUCL1Q96DR8 90 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 C16orf58Q96GQ5 468 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 MS4A4EQ96PG1 132 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 TNFRSF13CQ96RJ3 184 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 CXorf36Q9H7Y0 433 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 COQ10BQ9H8M1 238 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 HHATLQ9HCP6 504 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 UBQLN4Q9NRR5 601 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 SIRT5Q9NXA8 310 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 NPAP1Q9NZP6 1156 aa15.75■□□□□ 0.11
PDLIM4-202ENST00000379018 PLCE1Q9P212 2302 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 A0A1W2PNR3 127 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 GJE1A6NN92 205 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 UBFD1O14562 309 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 ZNF195O14628 629 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 OIP5O43482 229 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 EFNA2O43921 213 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 NGFRP08138 427 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 ALOX5P09917 674 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 LINGO3P0C6S8 592 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 EDNRAP25101 427 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 SLC7A1P30825 629 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 EIF1P41567 113 aaKnown RBP15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 PRKAA2P54646 552 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 SPOCK1Q08629 439 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 NDUFAF6Q330K2 333 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 ZNF385BQ569K4 471 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 IL17RELQ6ZVW7 336 aa15.74■□□□□ 0.11
PDLIM4-202ENST00000379018 TDRPQ86YL5 185 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms