RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CXCL14O95715 111 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 CATP04040 527 aaKnown RBP11.08□□□□□ -0.64
NPHP4-202ENST00000378161 KCNE1P15382 129 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MAGEA3P43357 314 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 NFKB2Q00653 900 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 SLC10A1Q14973 349 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF678Q5SXM1 525 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 Q6ZPB1 254 aaPredicted RBP11.08□□□□□ -0.64
NPHP4-202ENST00000378161 TSSK3Q96PN8 268 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 OR2AG1Q9H205 316 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 HIPK2Q9H2X6 1198 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 RBPJLQ9UBG7 517 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 MAST2Q6P0Q8 1798 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
NPHP4-202ENST00000378161 A0A0G2JLL6 359 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 YIF1AO95070 293 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TSPAN15O95858 294 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 BDKRB1P46663 353 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 DGKEP52429 567 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SGCGQ13326 291 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TSSK4Q6SA08 328 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF783Q6ZMS7 281 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 PRRT2Q7Z6L0 340 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 HBEGFQ99075 208 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SLC25A13Q9UJS0 675 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 FBXO10Q9UK96 956 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 NME7Q9Y5B8 376 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ITGB4P16144 1822 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 A0A0B4J293 547 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 CD8B2A6NJW9 211 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 HCRTO43612 131 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TLX2O43763 284 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF623O75123 536 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 CLDN11O75508 207 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 CD8BP10966 210 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SLC6A1P30531 599 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TLX1P31314 330 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 KIR3DL1P43629 444 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 IDH3GP51553 393 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RABGGTBP53611 331 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 GTF2H2Q13888 395 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 LEMD1Q68G75 181 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 GTF2H2CQ6P1K8 395 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 GOLGA7Q7Z5G4 137 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ZFP41Q8N8Y5 198 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 CPEB3Q8NE35 698 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 OSTF1Q92882 214 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 POLR2J3Q9H1A7 115 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ZFYVE1Q9HBF4 777 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 EXOSC1Q9Y3B2 195 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 PCYT1BQ9Y5K3 369 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 MYO18AQ92614 2054 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 FXYD1O00168 92 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RECKO95980 971 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 LINC00614P0C842 121 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 POU3F2P20265 443 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 CD52P31358 61 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RPL4P36578 427 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RPL3P39023 403 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.646e-7■■□□□ 13.2
NPHP4-202ENST00000378161 GAMTQ14353 236 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ST3GAL2Q16842 350 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 GLYR1Q49A26 553 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 HTR3DQ70Z44 454 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 LIMS2Q7Z4I7 341 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 THAP3Q8WTV1 239 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RAD9AQ99638 391 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 TCF25Q9BQ70 676 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SYT17Q9BSW7 474 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SLAMF8Q9P0V8 285 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SCML2Q9UQR0 700 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 MMACHCQ9Y4U1 282 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 MARF1Q9Y4F3 1742 aaKnown RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 C7orf66A4D0T2 115 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 M0R129 80 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 GFRA2O00451 464 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SULT1A3P0DMM9 295 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SULT1A4P0DMN0 295 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 RAB5AP20339 215 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 MAPK3P27361 379 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 STK19P49842 368 aaPredicted RBP11.07□□□□□ -0.64
NPHP4-202ENST00000378161 WNT4P56705 351 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 PAQR3Q6TCH7 311 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ABHD13Q7L211 337 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SLC5A8Q8N695 610 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 FAM86B1Q8N7N1 296 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 L3MBTL4Q8NA19 623 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 AQP11Q8NBQ7 271 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 NETO1Q8TDF5 533 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 ZNF599Q96NL3 588 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 PBDC1Q9BVG4 233 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 SLCO1B1Q9Y6L6 691 aa11.07□□□□□ -0.64
NPHP4-202ENST00000378161 STK16O75716 305 aa11.06□□□□□ -0.64
NPHP4-202ENST00000378161 CRYABP02511 175 aaKnown RBP11.06□□□□□ -0.64
NPHP4-202ENST00000378161 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms