RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PAX1P15863 534 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 P2RX1P51575 399 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 MAD2L1Q13257 205 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 PCLAFQ15004 111 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 CTU2Q2VPK5 515 aaKnown RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF385BQ569K4 471 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 STAC2Q6ZMT1 411 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF704Q6ZNC4 412 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 GALNT10Q86SR1 603 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 C4orf33Q8N1A6 199 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 GATSQ8NAP1 163 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 OR2T11Q8NH01 316 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 PHOSPHO1Q8TCT1 267 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 SFXN5Q8TD22 340 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 NUDT8Q8WV74 236 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 OR5P2Q8WZ92 322 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 OSTF1Q92882 214 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 FAM120BQ96EK7 910 aaKnown RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 PERPQ96FX8 193 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 SH3YL1Q96HL8 342 aaPredicted RBP13.2□□□□□ -0.3
HDAC6-204ENST00000376643 Q96MF0 132 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 ACTR6Q9GZN1 396 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
HDAC6-204ENST00000376643 NIPBLQ6KC79 2804 aaeCLIP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 SHISA8B8ZZ34 492 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 SHBGP04278 402 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PRPS1L1P21108 318 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PSMA4P25789 261 aaKnown RBP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 AGTR1P30556 359 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 SLC6A8P48029 635 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PTH2RP49190 550 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PPP2R2BQ00005 443 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 LASP1Q14847 261 aaKnown RBP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 ETFDHQ16134 617 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF239Q16600 458 aaKnown RBP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF611Q8N823 705 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 TOR1AIP2Q8NFQ8 470 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 CLHC1Q8NHS4 586 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PSMA8Q8TAA3 256 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 FBXO30Q8TB52 745 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 EPS8L3Q8TE67 593 aaKnown RBP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 RNF128Q8TEB7 428 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 TRIM44Q96DX7 344 aaPredicted RBP13.19□□□□□ -0.3
HDAC6-204ENST00000376643 MRGPRX4Q96LA9 322 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 TNFRSF12AQ9NP84 129 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 KLHL13Q9P2N7 655 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 BAIAP2L1Q9UHR4 511 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 PTGDR2Q9Y5Y4 395 aa13.19□□□□□ -0.3
HDAC6-204ENST00000376643 H7C1Q1 480 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 GTPBP1O00178 669 aaKnown RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 HS3ST1O14792 307 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 PIP5K1BO14986 540 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 PRKD3O94806 890 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 IL32P24001 234 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 SLC7A1P30825 629 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 CCT3P49368 545 aaKnown RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ATP12AP54707 1039 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 SELENBP1Q13228 472 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 P2RY6Q15077 328 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ARL13AQ5H913 290 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 EXOSC6Q5RKV6 272 aaKnown RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ANKRD34AQ69YU3 496 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 GSPT2Q8IYD1 628 aaKnown RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 KIRREL3Q8IZU9 778 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 OIT3Q8WWZ8 545 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 CDS1Q92903 461 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 PLPPR2Q96GM1 343 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 BHLHE41Q9C0J9 482 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 TUBB1Q9H4B7 451 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ESRP2Q9H6T0 727 aaKnown RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 TMEM185BQ9H7F4 350 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 KLHL9Q9P2J3 617 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 CLEC4AQ9UMR7 237 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ARID1AO14497 2285 aa13.18□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF469Q96JG9 3925 aaPredicted RBP13.18□□□□□ -0.3
HDAC6-204ENST00000376643 A0A0J9YW62 118 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 KLF4O43474 513 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 EIF4E2O60573 245 aaKnown RBP13.17□□□□□ -0.3
HDAC6-204ENST00000376643 AGR2O95994 175 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 SFTPDP35247 375 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 ZNF117Q03924 483 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 IFFO1Q0D2I5 559 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 FOXF1Q12946 379 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 CBFBQ13951 182 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 CD226Q15762 336 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 KLHL26Q53HC5 615 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 DCST2Q5T1A1 773 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 CCNJQ5T5M9 372 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 FNDC5Q8NAU1 212 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 HSD17B8Q92506 261 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 KISS1RQ969F8 398 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-204ENST00000376643 ARSGQ96EG1 525 aa13.17□□□□□ -0.3
HDAC6-204ENST00000376643 TRMT61AQ96FX7 289 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms