RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KLHL15Q96M94 604 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 C1QTNF3Q9BXJ4 246 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 INPP5EQ9NRR6 644 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 NPAP1Q9NZP6 1156 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 NDRG4Q9ULP0 352 aaKnown RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 ASB1Q9Y576 335 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 SNX11Q9Y5W9 270 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 BRWD1Q9NSI6 2320 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 C9J4A7 227 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 F5H5P2 479 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 GOSR2O14653 212 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 CACNG3O60359 315 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 APBB3O95704 486 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 AMY2BP19961 511 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 LSSP48449 732 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 CLRN1P58418 232 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 WDR45BQ5MNZ6 344 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 HACD4Q5VWC8 232 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 GSG1LQ6UXU4 331 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 PM20D2Q8IYS1 436 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 FAM109AQ8N4B1 249 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 OR13C3Q8NGS6 347 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 SFXN5Q8TD22 340 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 BRIX1Q8TDN6 353 aaKnown RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 HAVCR2Q8TDQ0 301 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 PNPLA2Q96AD5 504 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 C11orf54Q9H0W9 315 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 TMEM38AQ9H6F2 299 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 PCDHB16Q9NRJ7 776 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 DIMT1Q9UNQ2 313 aaKnown RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 SLC35A3Q9Y2D2 325 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 V9GY05 133 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 COL16A1Q07092 1604 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 NUP214P35658 2090 aaPredicted RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 EGFP01133 1207 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 ADH6P28332 368 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 CDK3Q00526 305 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 DEFB110Q30KQ9 67 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 DDX60LQ5H9U9 1706 aaKnown RBP10.83□□□□□ -0.68
PTCH1-203ENST00000375274 ANKRD34AQ69YU3 496 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 B3GLCTQ6Y288 498 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 OR52E1Q8NGJ3 308 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 SLC25A37Q9NYZ2 338 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 CORINQ9Y5Q5 1042 aa10.83□□□□□ -0.68
PTCH1-203ENST00000375274 DCDC2BA2VCK2 349 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 WASHC1A8K0Z3 465 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 H7C417 338 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PRAMEF2O60811 474 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NCR1O76036 304 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MT-ND4P03905 459 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SYPP08247 313 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ELAVL4P26378 380 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NTSR1P30989 418 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 RRAS2P62070 204 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 NKPD1Q17RQ9 610 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 INAVAQ3KP66 663 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ZC3H14Q6PJT7 736 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MBOAT4Q96T53 435 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PTTG3PQ9NZH4 202 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PPT2Q9UMR5 302 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ITGB4P16144 1822 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 TRAV27A0A087WT01 109 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 C17orf113A0A1B0GUU1 675 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ARSBP15848 533 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PTPN6P29350 595 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ELOCQ15369 112 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 DCST2Q5T1A1 773 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 OR56B4Q8NH76 319 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SLC7A13Q8TCU3 470 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MAFIPQ8WZ33 124 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ZDHHC12Q96GR4 267 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SLC25A44Q96H78 314 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 QRSL1Q9H0R6 528 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 FBXO8Q9NRD0 319 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 RCE1Q9Y256 329 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ASCC3Q8N3C0 2202 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 TCRBV5S2A0A599 114 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 HSPA12AO43301 675 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 CSO75390 466 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 IGLV3-25P01717 112 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 UGT2B7P16662 529 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PRKACBP22694 351 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 MMP12P39900 470 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 PFN3P60673 137 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 RPL19P84098 196 aaKnown RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SGCAQ16586 387 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SOWAHCQ53LP3 525 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SLX4IPQ5VYV7 408 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 KCTD20Q7Z5Y7 419 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 OR4C15Q8NGM1 316 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 SYNPRQ8TBG9 265 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 THAP3Q8WTV1 239 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 HOXD1Q9GZZ0 328 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 IKZF5Q9H5V7 419 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ZNF334Q9HCZ1 680 aaPredicted RBP10.82□□□□□ -0.68
PTCH1-203ENST00000375274 ALKBH4Q9NXW9 302 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 HSFX1Q9UBD0 423 aa10.82□□□□□ -0.68
PTCH1-203ENST00000375274 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms