RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 LDB3O75112 727 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 SYPP08247 313 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ANKRD19PQ9H560 264 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ZSCAN5BA6NJL1 495 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 PDE7AQ13946 482 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 GPR139Q6DWJ6 353 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 OR2T35Q8NGX2 323 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 THAP3Q8WTV1 239 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 NAA11Q9BSU3 229 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 SPATA6Q9NWH7 488 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 TEX10Q9NXF1 929 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 A8MVJ9 347 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 HNRNPFP52597 415 aaKnown RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 S100A10P60903 97 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 SFRP4Q6FHJ7 346 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ZNF704Q6ZNC4 412 aaPredicted RBP18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ENTHD1Q8IYW4 607 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 PGAM5Q96HS1 289 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 OBP2AQ9NY56 170 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ERVK-19Q9WJR5 959 aa18.31■□□□□ 0.52
TGFBR1-201ENST00000374990 ATXN7L3Q14CW9 347 aaPredicted RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 OR1Q1Q15612 314 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 BCL2L15Q5TBC7 163 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 CLDN22Q8N7P3 220 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 TM4SF18Q96CE8 201 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 ZNF587Q96SQ5 575 aaPredicted RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 SRPK3Q9UPE1 567 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 HOXC11O43248 304 aaPredicted RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 PIGAP37287 484 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 TRBV5-4A0A0C4DH59 114 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 ACOT7O00154 380 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 GABRA5P31644 462 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 NR0B1P51843 470 aaKnown RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 METTL11BQ5VVY1 283 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 MYADMQ96S97 322 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 SAGE1Q9NXZ1 904 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 SLC6A5Q9Y345 797 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 A6NIZ1 184 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 F5H0A9 414 aaPredicted RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 SGK494L7N484 410 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 XCR1P46094 333 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 RAP1BP61224 184 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 RAP1AP62834 184 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 TNFRSF17Q02223 184 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 KCTD20Q7Z5Y7 419 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 OR52R1Q8NGF1 315 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 MSLNLQ96KJ4 702 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 TPSD1Q9BZJ3 242 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 UBQLN4Q9NRR5 601 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 NUBP2Q9Y5Y2 271 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 MEIOCA2RUB1 952 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 HMX3A6NHT5 357 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 SCG5P05408 212 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 PLK5Q496M5 336 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 FOXRED2Q8IWF2 684 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 TREM1Q9NP99 234 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 FKBP14Q9NWM8 211 aa18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 THAP10Q9P2Z0 257 aaPredicted RBP18.3■□□□□ 0.52
TGFBR1-201ENST00000374990 PTHP01270 115 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PTGS2P35354 604 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 GLO1Q04760 184 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 SLX4IPQ5VYV7 408 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 ZNF486Q96H40 463 aaPredicted RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 SLC7A11Q9UPY5 501 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 TRAV18A0A075B6X5 111 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 FAM183AA6NL82 134 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 I6L893 689 aaPredicted RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 FZD6O60353 706 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PTGER1P34995 402 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 SLC35A2P78381 396 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 CDNFQ49AH0 187 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 CCNJQ5T5M9 372 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 POGLUT1Q8NBL1 392 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 OR5J2Q8NH18 312 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 AMDHD1Q96NU7 426 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 THAP7Q9BT49 309 aaPredicted RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 AK6Q9Y3D8 172 aaKnown RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 H0YGG7 62 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PRKAR1BP31321 381 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 ARF3P61204 181 aaPredicted RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 BEST3Q8N1M1 668 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 LILRA3Q8N6C8 439 aaPredicted RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 SDR9C7Q8NEX9 313 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 SPPL3Q8TCT6 385 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 GLIPR2Q9H4G4 154 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 HPF1Q9NWY4 346 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 GSKIPQ9P0R6 139 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 ZNF337Q9Y3M9 751 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 DRD5P21918 477 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 FAM69AQ5T7M9 428 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PRAMEF8Q5VWM4 474 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PRAMEF7Q5VXH5 474 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 ANKRD54Q6NXT1 300 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 ANKRD33Q7Z3H0 272 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 PDXPQ96GD0 296 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 VNN3Q9NY84 501 aa18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 DIMT1Q9UNQ2 313 aaKnown RBP18.29■□□□□ 0.52
TGFBR1-201ENST00000374990 TNFRSF4P43489 277 aa18.28■□□□□ 0.52
TGFBR1-201ENST00000374990 HES5Q5TA89 166 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms