RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 LSMEM1Q8N8F7 131 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OR4D9Q8NGE8 314 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM163Q8TC26 289 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 HS6ST2Q96MM7 605 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC38A2Q96QD8 506 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DPYSL5Q9BPU6 564 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MKKSQ9NPJ1 570 aaPredicted RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PNO1Q9NRX1 252 aaKnown RBP16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TBC1D23Q9NUY8 699 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM5Q9Y2B1 443 aa16.62■□□□□ 0.25
HLA-DQB1-201ENST00000374943 M0R082 166 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 POLR1CO15160 346 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TLX2O43763 284 aaPredicted RBP16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DDAH2O95865 285 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 BCL10O95999 233 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PTHP01270 115 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PPICP45877 212 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CTBP2P56545 445 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SNAPC1Q16533 368 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TIGD6Q17RP2 521 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MINDY4Q4G0A6 757 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF614Q8N883 585 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 BRIX1Q8TDN6 353 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 NAT6Q93015 286 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TSSK6Q9BXA6 273 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MED17Q9NVC6 651 aa16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ASCC3Q8N3C0 2202 aaKnown RBP16.61■□□□□ 0.25
HLA-DQB1-201ENST00000374943 A0A1W2PQM1 296 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CPED1A4D0V7 1026 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CNOT3O75175 753 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CDK4P11802 303 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF182P17025 639 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RORAP35398 523 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RBM34P42696 430 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RNF144AP50876 292 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SPCS2Q15005 226 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RHBDD2Q6NTF9 364 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RABEPKQ7Z6M1 372 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OR14A16Q8NHC5 309 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF721Q8TF20 911 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM80Q96HE8 168 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ART5Q96L15 291 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 LRR1Q96L50 414 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF582Q96NG8 517 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF426Q9BUY5 554 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TEX12Q9BXU0 123 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MRPS18AQ9NVS2 196 aaKnown RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 FLRT3Q9NZU0 649 aa16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ATXN7L1Q9ULK2 861 aaPredicted RBP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.6■□□□□ 0.25
HLA-DQB1-201ENST00000374943 A0A1B0GWA3 101 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 FRG2CA6NGY1 282 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SERINC4A6NH21 518 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 UNC119BA6NIH7 251 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 EFCAB7A8K855 629 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CDC42EP2O14613 210 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ADRA2AP08913 450 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CD36P16671 472 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 LIPAP38571 399 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 EFNA3P52797 238 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CCL7P80098 99 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 NNATQ16517 81 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMEM44Q2T9K0 475 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PGGHGQ32M88 737 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RPL13AP3Q6NVV1 102 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TMPRSS11FQ6ZWK6 438 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLITRK4Q8IW52 837 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 OR4Q3Q8NH05 313 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC2A12Q8TD20 617 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 TGIF2Q9GZN2 237 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 HOXD1Q9GZZ0 328 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 GAREM1Q9H706 876 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 FSCN3Q9NQT6 498 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC35A3Q9Y2D2 325 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CLCA3PQ9Y6N3 262 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 IRGMA1A4Y4 181 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SNTNA6NMZ2 147 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 KDM4EB2RXH2 506 aaPredicted RBP16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PRODHO43272 600 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ADAM11O75078 769 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 IL33O95760 270 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RPLP0P05388 317 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 LCN1P31025 176 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CSTF2P33240 577 aaKnown RBP eCLIP16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ADH7P40394 386 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 DCAF7P61962 342 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 KLHL26Q53HC5 615 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SLC46A3Q7Z3Q1 461 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF440Q8IYI8 595 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CYP4Z2PQ8N1L4 340 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 ZNF321PQ8N8H1 164 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 PLPP5Q8NEB5 264 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 FAM71CQ8NEG0 241 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 CEP76Q8TAP6 659 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 RACGAP1Q9H0H5 632 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 LRRN3Q9H3W5 708 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 SIDT1Q9NXL6 827 aaKnown RBP16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 MED31Q9Y3C7 131 aa16.59■□□□□ 0.25
HLA-DQB1-201ENST00000374943 EXPH5Q8NEV8 1989 aa16.58■□□□□ 0.24
HLA-DQB1-201ENST00000374943 IGLV3-12A0A075B6K2 115 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms