RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 SEC16AO15027 2179 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 FER1L5A0AVI2 2057 aa13.26□□□□□ -0.29
HMGA1-203ENST00000374116 AHCTF1Q8WYP5 2266 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 A0A0G2JMP0 313 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 FFAR1O14842 300 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 AIREO43918 545 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 MPZL2O60487 215 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 FGF5P12034 268 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ALAS2P22557 587 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 IDH2P48735 452 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CLK1P49759 484 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 KHKP50053 298 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 NCBP2P52298 156 aaKnown RBP eCLIP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SMIM11AP58511 58 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CDC42P60953 191 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 RPS15AP62244 130 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CTAG1AP78358 180 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 IL11RAQ14626 422 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TGIF1Q15583 401 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TBCEQ15813 527 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF517Q6ZMY9 492 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ZNF767PQ75MW2 155 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 KRT73Q86Y46 540 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 RAB43Q86YS6 212 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 GPR135Q8IZ08 494 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CSNK1A1LQ8N752 337 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 OR8K5Q8NH50 307 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ZCCHC10Q8TBK6 192 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 NT5CQ8TCD5 201 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ZFAND1Q8TCF1 268 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 UTP15Q8TED0 518 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 GTPBP3Q969Y2 492 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 MOAP1Q96BY2 351 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TM4SF19Q96DZ7 209 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TREX2Q9BQ50 279 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 OR51I1Q9H343 314 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SERHL2Q9H4I8 314 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 NMNAT1Q9HAN9 279 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 IMPAD1Q9NX62 359 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SEC14L3Q9UDX4 400 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 WASHC1A8K0Z3 465 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 C1QTNF9BB2RNN3 333 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 STK17BO94768 372 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ADAP00813 363 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 GASTP01350 101 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CDK1P06493 297 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 C1QTNF9P0C862 333 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 OR12D1P0DN82 309 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SLC15A1P46059 708 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TAGLNQ01995 201 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 GNA13Q14344 377 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 RTP5Q14D33 572 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 PTGES3Q15185 160 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CEBPEQ15744 281 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 LCN10Q6JVE6 187 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 FAM199XQ6PEV8 388 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 KLHL17Q6TDP4 642 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SPATC1Q76KD6 591 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 PRSS41Q7RTY9 318 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TIPARPQ7Z3E1 657 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 PLCZ1Q86YW0 608 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SLC7A6Q92536 515 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 GGHQ92820 318 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 COL21A1Q96P44 957 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SPATA5L1Q9BVQ7 753 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 RSPO3Q9BXY4 272 aaPredicted RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SLC7A5P2Q9GIP4 190 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CHRNA10Q9GZZ6 450 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 ZCCHC3Q9NUD5 404 aaKnown RBP13.25□□□□□ -0.29
HMGA1-203ENST00000374116 RHCGQ9UBD6 479 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 NDOR1Q9UHB4 597 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 TBC1D24Q9ULP9 559 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 SPEF1Q9Y4P9 236 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 CFAP47Q6ZTR5 3102 aa13.25□□□□□ -0.29
HMGA1-203ENST00000374116 A0A075B6Q4 140 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 ZAR1LA6NP61 321 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 FAAHO00519 579 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 SMIM10L1P0DMW3 83 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 NR2F1P10589 423 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 POU2F1P14859 743 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 ERP29P30040 261 aaKnown RBP13.24□□□□□ -0.29
HMGA1-203ENST00000374116 CRISP1P54107 249 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 FOXL2P58012 376 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 STXBP1P61764 594 aaKnown RBP13.24□□□□□ -0.29
HMGA1-203ENST00000374116 TGM3Q08188 693 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 DGCR6Q14129 220 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 SYPL1Q16563 259 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 TBRG1Q3YBR2 411 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 Q5BKY6 102 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 DCST1Q5T197 706 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 TMEM164Q5U3C3 297 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 TIGD3Q6B0B8 471 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 TCTN3Q6NUS6 607 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 SLC46A3Q7Z3Q1 461 aa13.24□□□□□ -0.29
HMGA1-203ENST00000374116 ASPGQ86U10 573 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms