RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PCDHGB6Q9Y5F9 930 aa14.48□□□□□ -0.09
TMEM53-204ENST00000372243 ANKRD11Q6UB99 2663 aaPredicted RBP14.48□□□□□ -0.09
TMEM53-204ENST00000372243 SLC25A12O75746 678 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 IFNW1P05000 195 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 UBTFL6P0CB48 400 aaPredicted RBP14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CNR1P21554 472 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 MSX1P28360 303 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 OR1E2P47887 323 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 RGS8P57771 180 aaPredicted RBP14.47□□□□□ -0.09
TMEM53-204ENST00000372243 BICRALQ6AI39 1079 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CARM1Q86X55 608 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 GATSQ8NAP1 163 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 DUSP19Q8WTR2 217 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 STMN2Q93045 179 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 TMEM41AQ96HV5 264 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 YY1AP1Q9H869 796 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 GALNT9Q9HCQ5 603 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 AP4S1Q9Y587 144 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 PTPRQQ9UMZ3 2332 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CHD8Q9HCK8 2581 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 FMO6PO60774 539 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 BCAS1O75363 584 aaPredicted RBP14.47□□□□□ -0.09
TMEM53-204ENST00000372243 F10P00742 488 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 FABP3P05413 133 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CD46P15529 392 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 ITGA2P17301 1181 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 TNFRSF1BP20333 461 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 TNFSF10P50591 281 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 P2RX1P51575 399 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 ZNF136P52737 540 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 VLDLRP98155 873 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 ZNF117Q03924 483 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 IQCCQ4KMZ1 466 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 PRAMEF20Q5VT98 475 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 SLC25A25Q6KCM7 469 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CBLN3Q6UW01 205 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 PACS2Q86VP3 889 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 ZDHHC21Q8IVQ6 265 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 OR4D11Q8NGI4 311 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 OR6T1Q8NGN1 323 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 SCMH1Q96GD3 660 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 WFDC6Q9BQY6 131 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 AMBRA1Q9C0C7 1298 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 PPP4R1LQ9P1A2 415 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 TESQ9UGI8 421 aaKnown RBP14.47□□□□□ -0.09
TMEM53-204ENST00000372243 ICAM5Q9UMF0 924 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 CARD8Q9Y2G2 431 aa14.47□□□□□ -0.09
TMEM53-204ENST00000372243 M0R3H8 397 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 FAAHO00519 579 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 HNRNPRO43390 633 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 HCRTR2O43614 444 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 NME2P1O60361 137 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 SP1P08047 785 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 NME2P22392 152 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 ACAA2P42765 397 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 SLC6A8P48029 635 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 RNF144AP50876 292 aaPredicted RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 SUMO3P55854 103 aaPredicted RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 TSEN54Q7Z6J9 526 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 RANBP3LQ86VV4 465 aaPredicted RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 LACC1Q8IV20 430 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 ZADH2Q8N4Q0 377 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 B4GALNT2Q8NHY0 566 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 VANGL1Q8TAA9 524 aaPredicted RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 PHF10Q8WUB8 498 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 PYDC1Q8WXC3 89 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 NR4A3Q92570 626 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 EXTL1Q92935 676 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 ARSGQ96EG1 525 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 CHID1Q9BWS9 393 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 POLR2J2Q9GZM3 115 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 POLR2J3Q9H1A7 115 aaKnown RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 PRORYQ9H606 182 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 S100A14Q9HCY8 104 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 ZMIZ1Q9ULJ6 1067 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 KLF13Q9Y2Y9 288 aaPredicted RBP14.46□□□□□ -0.09
TMEM53-204ENST00000372243 ENPP4Q9Y6X5 453 aa14.46□□□□□ -0.09
TMEM53-204ENST00000372243 SNPHO15079 494 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 OIP5O43482 229 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 FRS3O43559 492 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 TRIM3O75382 744 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-204ENST00000372243 UQCRBP14927 111 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 ELAVL4P26378 380 aaKnown RBP14.45□□□□□ -0.1
TMEM53-204ENST00000372243 EPS8Q12929 822 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 NPTX1Q15818 432 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 NDUFAF6Q330K2 333 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 EML6Q6ZMW3 1958 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 RBM45Q8IUH3 476 aaKnown RBP14.45□□□□□ -0.1
TMEM53-204ENST00000372243 NINQ8N4C6 2090 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 LSMEM1Q8N8F7 131 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 WDSUB1Q8N9V3 476 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 TMEM178AQ8NBL3 297 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 OR5W2Q8NH69 310 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 C5orf34Q96MH7 638 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 ZNF300Q96RE9 604 aaPredicted RBP14.45□□□□□ -0.1
TMEM53-204ENST00000372243 ZNF347Q96SE7 839 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 FAM173AQ9BQD7 235 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 ZNF559Q9BR84 538 aa14.45□□□□□ -0.1
TMEM53-204ENST00000372243 NDUFAF4Q9P032 175 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms