RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CER1O95813 267 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 CLIC3O95833 236 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 HLA-DOBP13765 273 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 MLC1Q15049 377 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 RAB11BQ15907 218 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 BAK1Q16611 211 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 SUSD1Q6UWL2 747 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 PLXDC1Q8IUK5 500 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 SLC24A4Q8NFF2 622 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 HAO2Q9NYQ3 351 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 DKKL1Q9UK85 242 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 PCDHB14Q9Y5E9 798 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 UFM1P61960 85 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 TLE4Q04727 773 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 AGTRAPQ6RW13 159 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 PQLC3Q8N755 202 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 MVB12BQ9H7P6 319 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 NIPAL2Q9H841 368 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 FBXL4Q9UKA2 621 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.28
RAPGEF1-202ENST00000372190 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TNFSF12O43508 249 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TRAF3IP2O43734 574 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 SOX14O95416 240 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 HLA-HP01893 362 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 MMP7P09237 267 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 LCN6P62502 163 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ADIRFQ15847 76 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TTLL10Q6ZVT0 673 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 PIM3Q86V86 326 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 VN1R2Q8NFZ6 395 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 PNPLA2Q96AD5 504 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 SEC61A2Q9H9S3 476 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 RARRES3Q9UL19 164 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 AQP9O43315 295 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 STC1P52823 247 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 PITX1P78337 314 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 OLIG2Q13516 323 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ARL6IP1Q15041 203 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR51G2Q8NGK0 314 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 MARC2Q969Z3 335 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 RBMXL1Q96E39 390 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 FAM173AQ9BQD7 235 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 HERPUD2Q9BSE4 406 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 SLAMF7Q9NQ25 335 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 WBP1LQ9NX94 342 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TMEM235A6NFC5 223 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 MT-ND4LP03901 98 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 CA5AP35218 305 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 RPS19P39019 145 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 NPBWR1P48145 328 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ATP4BP51164 291 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 HMGCS1Q01581 520 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ACY1Q03154 408 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 KCNAB2Q13303 367 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZC3H3Q8IXZ2 948 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 NDNFQ8TB73 568 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 LRRC15Q8TF66 581 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 TSGA13Q96PP4 275 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR8D2Q9GZM6 311 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 DNMT3BQ9UBC3 853 aaKnown RBP13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR1A2Q9Y585 309 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 KPTNQ9Y664 436 aa13.27□□□□□ -0.29
RAPGEF1-202ENST00000372190 SCDO00767 359 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 ADRB1P08588 477 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 PTPRCAPQ14761 206 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 NR0B2Q15466 257 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 ZMAT1Q5H9K5 638 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 SIGLECL1Q8N7X8 197 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 BBS10Q8TAM1 723 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 TOE1Q96GM8 510 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 SH3YL1Q96HL8 342 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 GPR22Q99680 433 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 SCPEP1Q9HB40 452 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 GRHPRQ9UBQ7 328 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 A0A1W2PP18 115 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 PRAMEF26H0Y7S4 382 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 IGFBP1P08833 259 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 PIGFQ07326 219 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 ABLIM2Q6H8Q1 611 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 OR4F3Q6IEY1 312 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 AKAIN1P0CW23 69 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 ACRV1P26436 265 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 BRICD5Q6PL45 260 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 TMEM150AQ86TG1 271 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 SNX18Q96RF0 628 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 RANGRFQ9HD47 186 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 A6NHS1 94 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 NAT2P11245 290 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 GPR85P60893 370 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 Q1RN00 199 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 FRG2Q64ET8 278 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 REEP3Q6NUK4 255 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 GLIS1Q8NBF1 620 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 C16orf78Q8WTQ4 265 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 FRG2BQ96QU4 278 aa13.26□□□□□ -0.29
RAPGEF1-202ENST00000372190 DHRS9Q9BPW9 319 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms