RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 LRRC37A5PQ49AS3 106 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 LINC01465Q8N7H1 131 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR52B6Q8NGF0 335 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 MOCOSQ96EN8 888 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 SARDHQ9UL12 918 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 TXNDC12O95881 172 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 HERV-K104P61576 105 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ACTA2P62736 377 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ACTG2P63267 376 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 AVPI1Q5T686 147 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 IGFN1Q86VF2 1251 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR52P1PQ8NH57 321 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 MYLIPQ8WY64 445 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 CWH43Q9H720 699 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 KCMF1Q9P0J7 381 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 DNAJC15Q9Y5T4 150 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 NUPL2O15504 423 aaKnown RBP12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 TOXO94900 526 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 PARM1Q6UWI2 310 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF100Q8IYN0 542 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC43A2Q8N370 569 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 NDNFQ8TB73 568 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 THAP4Q8WY91 577 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ATG5Q9H1Y0 275 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 WASH6PQ9NQA3 447 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM181Q9P2C4 612 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 C11orf98E9PRG8 122 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 G3V2L1 256 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 EDIL3O43854 480 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 IFNA1P01562 189 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 GPR143P51810 404 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 TTTY10Q9BZA0 68 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC9B1P1A6NJY1 282 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 CACNG3O60359 315 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 C1SP09871 688 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 FAM198BQ6UWH4 519 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 ISCA2Q86U28 154 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 LRR1Q96L50 414 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 C12orf57Q99622 126 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 TBX21Q9UL17 535 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 HS3ST2Q9Y278 367 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 A0A1B0GUL6 1792 aa12.55□□□□□ -0.4
RAPGEF1-201ENST00000372189 LOC285095A0A1B0GVY8 99 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 H3BSH0 61 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 AQP9O43315 295 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 UGDHO60701 494 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SOX2P48431 317 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 MS4A2Q01362 244 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 KEAP1Q14145 624 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SPATC1Q76KD6 591 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMPRSS9Q7Z410 1059 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 KLBQ86Z14 1044 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SYT4Q9H2B2 425 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 PTRH2Q9Y3E5 179 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 K7ERU9 68 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ADH7P40394 386 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FRKP42685 505 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 MRPL19P49406 292 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SMAD4Q13485 552 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 LHX8Q68G74 356 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 LARP4Q71RC2 724 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 TMEM151BQ8IW70 566 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR6N2Q8NGY6 317 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR2M2Q96R28 347 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC22A31A6NKX4 558 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 LRIT3Q3SXY7 679 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 SLC22A10Q63ZE4 541 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF765Q7L2R6 523 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 MCATQ8IVS2 390 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 BEST3Q8N1M1 668 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 HOXD1Q9GZZ0 328 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 NANSQ9NR45 359 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 THAP10Q9P2Z0 257 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 NLKQ9UBE8 527 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ASB4Q9Y574 426 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 RPS17P08708 135 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 EMP2P54851 167 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ZNF33BQ06732 778 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 IER5LQ5T953 404 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FIGNL1Q6PIW4 674 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 FBXO27Q8NI29 283 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 TESCQ96BS2 214 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ALOXE3Q9BYJ1 711 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 VSTM2BA6NLU5 285 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 OR7A17O14581 309 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 S1PR1P21453 382 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 RIN1Q13671 783 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ARHGAP19Q14CB8 494 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 ALG10Q5BKT4 473 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 COMMD6Q7Z4G1 85 aa12.54□□□□□ -0.4
RAPGEF1-201ENST00000372189 CLEC1AQ8NC01 280 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms