RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ACAA2P42765 397 aaKnown RBP24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 C3orf38Q5JPI3 329 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 FAM69BQ5VUD6 431 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 C1orf94Q6P1W5 598 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 TIPARPQ7Z3E1 657 aaKnown RBP24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 PITX2Q99697 317 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 YTHDF1Q9BYJ9 559 aaKnown RBP24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 ZNF700Q9H0M5 742 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 FLRT3Q9NZU0 649 aa24.18■■□□□ 1.46
ATPAF1-202ENST00000371937 ICOSLGO75144 302 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 TCN2P20062 427 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 EPHA2P29317 976 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 RAPSNQ13702 412 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 PCOLCEQ15113 449 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 ISLR2Q6UXK2 745 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 CD300LDQ6UXZ3 194 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 ZER1Q7Z7L7 766 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 NKAIN4Q8IVV8 208 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 LSMEM1Q8N8F7 131 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 IGHV1-45A0A0A0MS14 117 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 OR6C70A6NIJ9 312 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 ENDOUP21128 410 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 MMP11P24347 488 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 LIMK1P53667 647 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 ISL1P61371 349 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 FNDC7Q5VTL7 733 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 APLFQ8IW19 511 aaPredicted RBP24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 ESX1Q8N693 406 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 FAM71CQ8NEG0 241 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 POLR1BQ9H9Y6 1135 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 LIN28AQ9H9Z2 209 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 KRCC1Q9NPI7 259 aaPredicted RBP24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 NPFFR2Q9Y5X5 522 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 HS3ST3B1Q9Y662 390 aa24.17■■□□□ 1.46
ATPAF1-202ENST00000371937 FTH1P19P0C7X4 201 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 UBL4AP11441 157 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 OSMP13725 252 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 GSTM3P21266 225 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 EXT1Q16394 746 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 PIGXQ8TBF5 258 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 PHOSPHO1Q8TCT1 267 aa24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 EXOSC3Q9NQT5 275 aaKnown RBP24.16■■□□□ 1.46
ATPAF1-202ENST00000371937 A0A1W2PQD3 144 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 GTPBP1O00178 669 aaKnown RBP24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 IL5RAQ01344 420 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 EFR3AQ14156 821 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 KCTD21Q4G0X4 260 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 MBOAT2Q6ZWT7 520 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 CACTIN-AS1Q8N1I8 211 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 GNPDA2Q8TDQ7 276 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 CT55Q8WUE5 264 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 B3GNT4Q9C0J1 378 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 FOXJ2Q9P0K8 574 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 TCFL5Q9UL49 500 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 PCDHGA6Q9Y5G7 932 aa24.15■■□□□ 1.46
ATPAF1-202ENST00000371937 NAGAP17050 411 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 CRISP1P54107 249 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 NUP107P57740 925 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 RPS15P62841 145 aaKnown RBP24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 CD47Q08722 323 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 BTBD16Q32M84 506 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 RNF113BQ8IZP6 322 aaKnown RBP24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 AMER2Q8N7J2 671 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 ELP5Q8TE02 316 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 THAP3Q8WTV1 239 aaPredicted RBP24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 PRSS27Q9BQR3 290 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 DEFB126Q9BYW3 111 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 REV1Q9UBZ9 1251 aa24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 FARSAQ9Y285 508 aaKnown RBP24.14■■□□□ 1.46
ATPAF1-202ENST00000371937 A0A0B4J2E0 115 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 A0A1B0GX12 115 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 A0A1W2PQ72 361 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 ALG1L2C9J202 215 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 ZNF264O43296 627 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 PPM1BO75688 479 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 COX6A1P12074 109 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 GGT2P36268 569 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 COPZ1P61923 177 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 CD226Q15762 336 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 APOOLQ6UXV4 268 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 RNF217Q8TC41 542 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 TMEM255BQ8WV15 326 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 IMMP1LQ96LU5 166 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 ZBTB20Q9HC78 741 aaPredicted RBP24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 MYOTQ9UBF9 498 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 RPS6KB2Q9UBS0 482 aa24.14■■□□□ 1.45
ATPAF1-202ENST00000371937 MUC6Q6W4X9 2439 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 SPAARA0A1B0GVQ0 90 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 A0A1B0GWA3 101 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 CHP2O43745 196 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 ADAM11O75078 769 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 CHMP24386 653 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 PLAG1Q6DJT9 500 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 KIRREL2Q6UWL6 708 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 PRICKLE2Q7Z3G6 844 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 GATSQ8NAP1 163 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 FBLIM1Q8WUP2 373 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 HDAC2Q92769 488 aaKnown RBP24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 MPP4Q96JB8 637 aa24.13■■□□□ 1.45
ATPAF1-202ENST00000371937 HS6ST2Q96MM7 605 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms