RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 OR9Q1Q8NGQ5 310 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 CNIH3Q8TBE1 160 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 M1APQ8TC57 530 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SPPL2AQ8TCT8 520 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 CREB3L4Q8TEY5 395 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 PSMF1Q92530 271 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 HAS2Q92819 552 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 PPCDCQ96CD2 204 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ZNF764Q96H86 408 aaPredicted RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SMIM10Q96HG1 83 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ALPK1Q96QP1 1244 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SIGLEC11Q96RL6 698 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 BARD1Q99728 777 aaKnown RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SPATA5L1Q9BVQ7 753 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 RBCK1Q9BYM8 510 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ROGDIQ9GZN7 287 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 MOV10Q9HCE1 1003 aaKnown RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 PRDM9Q9NQV7 894 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 LANCL2Q9NS86 450 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 FKBP14Q9NWM8 211 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 TAS2R9Q9NYW1 312 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SELENONQ9NZV5 590 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 SEC14L4Q9UDX3 406 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 MGAT4BQ9UQ53 548 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 MRPS33Q9Y291 106 aaKnown RBP9.61□□□□□ -0.87
COL5A1-202ENST00000371820 MMACHCQ9Y4U1 282 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 ITPR2Q14571 2701 aa9.61□□□□□ -0.87
COL5A1-202ENST00000371820 A0A1W2PRB8 838 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR5H15A6NDH6 313 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 ANKUB1A6NFN9 424 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 hCG_2039718K7EN88 272 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CLDN4O14493 209 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 ERI3O43414 337 aaKnown RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 B3GALT2O43825 422 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 XPNPEP2O43895 674 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CDC123O75794 336 aaPredicted RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SEMA3DO95025 777 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CCNB2O95067 398 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CLDN1O95832 211 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 MT-ND2P03891 347 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 LAMP1P11279 417 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PIPP12273 146 aaPredicted RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 EDN3P14138 238 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 FMO3P31513 532 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CRATP43155 626 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 TMED10P49755 219 aaKnown RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 TNFSF10P50591 281 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 TRA2BP62995 288 aaKnown RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 VLDLRP98155 873 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CDK6Q00534 326 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 C2orf80Q0P641 193 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 COX10Q12887 443 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PDE7AQ13946 482 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SCARB2Q14108 478 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 TIGD6Q17RP2 521 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 ADPRMQ3LIE5 342 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PLEKHG7Q6ZR37 379 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 HS3ST5Q8IZT8 346 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 LGI4Q8N135 537 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 METTL4Q8N3J2 472 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 BCORP1Q8N888 145 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR2L5Q8NG80 312 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR10G2Q8NGC3 310 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR5T3Q8NGG3 340 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR1N1Q8NGS0 311 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PSMA8Q8TAA3 256 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 OR5P2Q8WZ92 322 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 TAMM41Q96BW9 452 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 EGLN2Q96KS0 407 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PTCHD1Q96NR3 888 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SERINC2Q96SA4 455 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 PIP5K1AQ99755 562 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 MESP1Q9BRJ9 268 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CDCA4Q9BXL8 241 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 NXF2Q9GZY0 626 aaKnown RBP9.6□□□□□ -0.87
COL5A1-202ENST00000371820 DCSTAMPQ9H295 470 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 MMP25Q9NPA2 562 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SLC6A13Q9NSD5 602 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 EXD2Q9NVH0 621 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 ABCG2Q9UNQ0 655 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 RNF6Q9Y252 685 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CFL2Q9Y281 166 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SLC5A6Q9Y289 635 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 NTNG1Q9Y2I2 539 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CSAG2Q9Y5P2 127 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 LYVE1Q9Y5Y7 322 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 ENPP4Q9Y6X5 453 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 SPACA6W5XKT8 324 aa9.6□□□□□ -0.87
COL5A1-202ENST00000371820 CENPEQ02224 2701 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 A0A075B6Q4 140 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 IGHV3-20A0A0C4DH32 117 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 LRIT2A6NDA9 550 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 C5orf58C9J3I9 102 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 B4GALT2O60909 372 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 GUCY1B2O75343 617 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 TNFRSF21O75509 655 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 SERPINB7O75635 380 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 GADD45GO95257 159 aa9.59□□□□□ -0.87
COL5A1-202ENST00000371820 PTTG1O95997 202 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms