RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 TRIM77I1YAP6 450 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 EIF3FO00303 357 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 IRF2P14316 349 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 GABRA2P47869 451 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TBCEQ15813 527 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 OR9Q2Q8NGE9 314 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ACDQ96AP0 544 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 IKZF4Q9H2S9 585 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 PRODH2Q9UF12 536 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SLC2A6Q9UGQ3 507 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 PRPS1P60891 318 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TMEM156Q8N614 296 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TSSK2Q96PF2 358 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 MCOLN1Q9GZU1 580 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 GOLGA2P5Q9HBQ8 144 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SNNO75324 88 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 NSA2O95478 260 aaKnown RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 HYAL2Q12891 473 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 IQCJQ1A5X6 159 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 CARD17Q5XLA6 110 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 FBXW12Q6X9E4 464 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 C20orf85Q9H1P6 137 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 A6NLC8 198 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 F6UZH7 168 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 C19orf35Q6ZS72 473 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TIPARPQ7Z3E1 657 aaKnown RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SLC43A2Q8N370 569 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 PRR18Q8N4B5 295 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 CELF2-AS1Q8N7Q2 184 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 OR4K13Q8NH42 304 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 PPTC7Q8NI37 304 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SCN3AQ9NY46 2000 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 A8MVM7 634 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 B4GALT2O60909 372 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF780AO75290 641 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 NME1P15531 152 aaKnown RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 PSMB1P20618 241 aaKnown RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 LILRA4P59901 499 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 MBTPS1Q14703 1052 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 SBSNQ6UWP8 590 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 EHFQ9NZC4 300 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 NDRG3Q9UGV2 375 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 LOC102724200A0A096LPH7 203 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 CAMK2BQ13554 666 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 GDPD4Q6W3E5 623 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 RHOUQ7L0Q8 258 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF440Q8IYI8 595 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 TAF9BQ9HBM6 251 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 BDKRB1P46663 353 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 SLC22A6Q4U2R8 563 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 C6orf120Q7Z4R8 191 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 TECTBQ96PL2 329 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 TM7SF3Q9NS93 570 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 LYRM2Q9NU23 88 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 OSGIN2Q9Y236 505 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 OMGP23515 440 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 KCNJ5P48544 419 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 OR13C2Q8NGS9 318 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 SUV39H2Q9H5I1 410 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 NPFFR2Q9Y5X5 522 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 VEGFAP15692 232 aaPredicted RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 CLCNKBP51801 687 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 LTBQ06643 244 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 DGKZQ13574 1117 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 MRPL10Q7Z7H8 261 aaKnown RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 BPIFB2Q8N4F0 458 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 VAMP8Q9BV40 100 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 ST6GALNAC4Q9H4F1 302 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 HHATLQ9HCP6 504 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 SLC2A8Q9NY64 477 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 GJD2Q9UKL4 321 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 BOLA1Q9Y3E2 137 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 PSAT1Q9Y617 370 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 YJEFN3A6XGL0 299 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 ANHXE9PGG2 379 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 NME4O00746 187 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 EMC8O43402 210 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 RPS18P62269 152 aaKnown RBP14.43□□□□□ -0.1
COL5A1-201ENST00000371817 IGDCC3Q8IVU1 814 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 SLC35B4Q969S0 331 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 KCMF1Q9P0J7 381 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 RHBDD3Q9Y3P4 386 aa14.43□□□□□ -0.1
COL5A1-201ENST00000371817 A6NIN4 97 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 FTCDNL1E5RQL4 147 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 PDHXO00330 501 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 CXCL11O14625 94 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 OR2T1O43869 369 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 LSMEM2Q8N112 164 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 MRPL22Q9NWU5 206 aaKnown RBP14.42□□□□□ -0.1
COL5A1-201ENST00000371817 PRELID3BQ9Y3B1 194 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 FER1L4A9Z1Z3 1794 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 IGFBP1P08833 259 aaPredicted RBP14.42□□□□□ -0.1
COL5A1-201ENST00000371817 IL17RCQ8NAC3 791 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 ANGPTL6Q8NI99 470 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 DUSP19Q8WTR2 217 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 ARNTL2Q8WYA1 636 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 SORCS2Q96PQ0 1159 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 SLC25A18Q9H1K4 315 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 INPP5EQ9NRR6 644 aa14.42□□□□□ -0.1
COL5A1-201ENST00000371817 ENPP4Q9Y6X5 453 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms