RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 SNRPBP14678 240 aaKnown RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PPP3CBP16298 524 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PRPS1P60891 318 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 SHC2P98077 582 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 BCDIN3DQ7Z5W3 292 aaKnown RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TMEM25Q86YD3 366 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CSNK1A1LQ8N752 337 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 OR52I1Q8NGK6 324 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 OR4C15Q8NGM1 316 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF480Q8WV37 535 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TCEAL3Q969E4 200 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 OR1A2Q9Y585 309 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 IFNA17P01571 189 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 MTHFD2P13995 350 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF16P17020 682 aaPredicted RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TGFBR1P36897 503 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CTSCP53634 463 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 ALG10Q5BKT4 473 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TCTE1Q5JU00 501 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 CDS1Q92903 461 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PTCHD1Q96NR3 888 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 ZNF334Q9HCZ1 680 aaPredicted RBP14.96□□□□□ -0.01
COL17A1-202ENST00000369733 ACTR10Q9NZ32 417 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 RAD1O60671 282 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 AWAT2Q6E213 333 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 PNPLA2Q96AD5 504 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 APMAPQ9HDC9 416 aa14.96□□□□□ -0.01
COL17A1-202ENST00000369733 TRAV27A0A087WT01 109 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF850A8MQ14 1090 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 TAPBPO15533 448 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 SNAPINO95295 136 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 EGFP01133 1207 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 TCRBP04435 133 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 OR8U9P0C7N5 309 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 SORDQ00796 357 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 SOWAHCQ53LP3 525 aaPredicted RBP14.96□□□□□ -0.02
COL17A1-202ENST00000369733 CLLU1OSQ5K130 101 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 COX20Q5RI15 118 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 SLC38A5Q8WUX1 472 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 TLR9Q9NR96 1032 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 ASB6Q9NWX5 421 aa14.96□□□□□ -0.02
COL17A1-202ENST00000369733 A0A1W2PP55 124 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 MEGF11A6BM72 1044 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 RAD51DO75771 328 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 AQP6Q13520 282 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF546Q86UE3 836 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 KLHL15Q96M94 604 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 DCDC2BA2VCK2 349 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 IFNA5P01569 189 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 RHOP08100 348 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NFYAP23511 347 aaPredicted RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 GDNFP39905 211 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NKX3-2P78367 333 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 PUS10Q3MIT2 529 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 ANKRD34AQ69YU3 496 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 RBPMSQ93062 196 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 TNFRSF12AQ9NP84 129 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 LHX3Q9UBR4 397 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NDRG4Q9ULP0 352 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NPIPA5A0A0B4J1W7 369 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NPIPA7E9PJI5 369 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 SULT1C2O00338 296 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 SLC33A1O00400 549 aaPredicted RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 KIAA0355O15063 1070 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 TGM6O95932 706 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NPIPA8P0DM63 369 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 GPX2P18283 190 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 FUT1P19526 365 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 MTNR1BP49286 362 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 TAGLNQ01995 201 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 FCRLAQ7L513 359 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 CDRT4Q8N9R6 151 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 L3MBTL4Q8NA19 623 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 OR7D2Q96RA2 312 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 FN3KQ9H479 309 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 UNKLQ9H9P5 680 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 SRPX2O60687 465 aaPredicted RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 PSMB1P20618 241 aaKnown RBP14.95□□□□□ -0.02
COL17A1-202ENST00000369733 DYRK1AQ13627 763 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 LRIF1Q5T3J3 769 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 SFXN4Q6P4A7 337 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 SFXN5Q8TD22 340 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 NEDD4LQ96PU5 975 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 B3GNT2Q9NY97 397 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 ZNF226Q9NYT6 803 aa14.95□□□□□ -0.02
COL17A1-202ENST00000369733 H0YIV9 168 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 RNH1P13489 461 aaKnown RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HOXB2P14652 356 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 IL1RNP18510 177 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ELAVL4P26378 380 aaKnown RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HSF5Q4G112 596 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 OR6V1Q8N148 313 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 SVBPQ8N300 66 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 STEAP2Q8NFT2 490 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 HAVCR2Q8TDQ0 301 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ZBTB8AQ96BR9 441 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 WDR77Q9BQA1 342 aaPredicted RBP14.94□□□□□ -0.02
COL17A1-202ENST00000369733 PHLPP1O60346 1717 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 LATO43561 262 aa14.94□□□□□ -0.02
COL17A1-202ENST00000369733 ADAM23O75077 832 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms