RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SLC37A1P57057 533 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 POU6F2P78424 691 aaPredicted RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 MAT1AQ00266 395 aaKnown RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 OCA2Q04671 838 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 IL18R1Q13478 541 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 MED21Q13503 144 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 DGCR6Q14129 220 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 LARS2Q15031 903 aaKnown RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 TAF11Q15544 211 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 ZNF141Q15928 474 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SYPL1Q16563 259 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 EIPR1Q53HC9 387 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 DCAF10Q5QP82 559 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 TYW3Q6IPR3 259 aaKnown RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 CD300LDQ6UXZ3 194 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 USP51Q70EK9 711 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 AMIGO2Q86SJ2 522 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 PEX5LQ8IYB4 626 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 ARMC10Q8N2F6 343 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 ZNF619Q8N2I2 560 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 PARP8Q8N3A8 854 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 CBR4Q8N4T8 237 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 OR4C15Q8NGM1 316 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 OR1N1Q8NGS0 311 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 STT3BQ8TCJ2 826 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SPPL2AQ8TCT8 520 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 KAT2AQ92830 837 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 RAB8BQ92930 207 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SDCCAG3Q96C92 435 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 C16orf58Q96GQ5 468 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SENP5Q96HI0 755 aaPredicted RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 COL21A1Q96P44 957 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 PIP5K1AQ99755 562 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SLC29A1Q99808 456 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 FUZQ9BT04 418 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 RSPO3Q9BXY4 272 aaPredicted RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 YTHDF1Q9BYJ9 559 aaKnown RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 HOXD1Q9GZZ0 328 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 OR10A5Q9H207 317 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 ARMC7Q9H6L4 198 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 REEP1Q9H902 201 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 Q9N2J8 555 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 KLHL28Q9NXS3 571 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 SMPD3Q9NY59 655 aaPredicted RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 C3orf18Q9UK00 162 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 TMA7Q9Y2S6 64 aaKnown RBP8.09□□□□□ -1.11
SNX27-201ENST00000368838 WDR45Q9Y484 360 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 HSPE1-MOB4S4R3N1 261 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 POLEQ07864 2286 aa8.09□□□□□ -1.11
SNX27-201ENST00000368838 A0A1W2PNR3 127 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 C7orf72A4D263 438 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 TRIM64A6NGJ6 449 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 PRAMEF25A6NGN4 478 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 FRG2CA6NGY1 282 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 JRKO75564 520 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CLDN1O95832 211 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 DDAH2O95865 285 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 IGHEP01854 428 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ALPPP05187 535 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ZGLP1P0C6A0 271 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CT45A8P0DMV1 189 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CT45A9P0DMV2 189 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 NID1P14543 1247 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ITGA3P26006 1051 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 OR1D4P47884 311 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ERFP50548 548 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 PRKAG1P54619 331 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 RAD23AP54725 363 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 AQP4P55087 323 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 RPS26P62854 115 aaKnown RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 BTG2P78543 158 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 HPCAP84074 193 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CHRNEQ04844 493 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 SSPNQ14714 243 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 SLC36A3Q495N2 470 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CT45A2Q5DJT8 189 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 DCST2Q5T1A1 773 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 TTC23Q5W5X9 447 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 KDM4DQ6B0I6 523 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 C16orf62Q7Z3J2 963 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 VTCN1Q7Z7D3 282 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CYP4Z1Q86W10 505 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CHERPQ8IWX8 916 aaKnown RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 PRSS58Q8IYP2 241 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 OFCC1Q8IZS5 231 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 AMER2Q8N7J2 671 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 COX18Q8N8Q8 333 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ZNF441Q8N8Z8 693 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CLEC1AQ8NC01 280 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 OR52R1Q8NGF1 315 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 OR5D16Q8NGK9 328 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 OR2Y1Q8NGV0 311 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 NUBPLQ8TB37 319 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ZNF721Q8TF20 911 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 ADIPOR1Q96A54 375 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 HSPBAP1Q96EW2 488 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 CIB1Q99828 191 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 VN1R1Q9GZP7 353 aa8.08□□□□□ -1.12
SNX27-201ENST00000368838 SOX17Q9H6I2 414 aaPredicted RBP8.08□□□□□ -1.12
SNX27-201ENST00000368838 ZNF552Q9H707 407 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms