RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ATG2AQ2TAZ0 1938 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 GPR179Q6PRD1 2367 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 COL6A3P12111 3177 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 FAM86C2PA6NEL3 165 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 GPX5O75715 221 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 CD1CP29017 333 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 FOXL2P58012 376 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 MANEAQ5SRI9 462 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 RASSF6Q6ZTQ3 369 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 SMAP2Q8WU79 429 aaPredicted RBP12.8□□□□□ -0.36
SHC1-202ENST00000368445 HDHD5Q9BXW7 423 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 ZNF350Q9GZX5 532 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 TNFRSF10DQ9UBN6 386 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 CAB39Q9Y376 341 aaPredicted RBP12.8□□□□□ -0.36
SHC1-202ENST00000368445 DSPPQ9NZW4 1301 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 KHNYNO15037 678 aaKnown RBP12.8□□□□□ -0.36
SHC1-202ENST00000368445 CTNSO60931 367 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 SNX4O95219 450 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 FOSL2P15408 326 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 STAT5AP42229 794 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 OMPP47874 163 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 EMDP50402 254 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 DECR1Q16698 335 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 CXXC5Q7LFL8 322 aaKnown RBP12.8□□□□□ -0.36
SHC1-202ENST00000368445 FAM26EQ8N5C1 309 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 OR4Q3Q8NH05 313 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 UBQLN3Q9H347 655 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 LRRN3Q9H3W5 708 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 PI4KAP42356 2102 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 DENND4AQ7Z401 1863 aa12.8□□□□□ -0.36
SHC1-202ENST00000368445 CDHR4A6H8M9 788 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 BCAT2O15382 392 aaPredicted RBP12.79□□□□□ -0.36
SHC1-202ENST00000368445 HMGN1P05114 100 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 HBQ1P09105 142 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 HTR2AP28223 471 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 CXCL12P48061 93 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 GRM7Q14831 915 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 UTS2BQ765I0 119 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 OR5M3Q8NGP4 307 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 C16orf52Q8NHV5 167 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 THAP3Q8WTV1 239 aaPredicted RBP12.79□□□□□ -0.36
SHC1-202ENST00000368445 DHRS1Q96LJ7 313 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 OPALINQ96PE5 141 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 LMF1Q96S06 567 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 SLIRPQ9GZT3 109 aaKnown RBP12.79□□□□□ -0.36
SHC1-202ENST00000368445 OR10A5Q9H207 317 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 MMP27Q9H306 513 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 A0A1B0GWA3 101 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 LOC110117498-PIK3R3F6TDL0 507 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 FOXS1O43638 330 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 THY1P04216 161 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 ZNF12P17014 697 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 MAKP20794 623 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 CSTF1Q05048 431 aaKnown RBP12.79□□□□□ -0.36
SHC1-202ENST00000368445 CEBPEQ15744 281 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 PGGHGQ32M88 737 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 VWA2Q5GFL6 755 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 OR4C3Q8NH37 302 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 ZNF563Q8TA94 476 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 NDC1Q9BTX1 674 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 ENKD1Q9H0I2 346 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 PPP1R3DO95685 299 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 PSG6Q00889 435 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 NSDHLQ15738 373 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 SSX1Q16384 188 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 CCDC157Q569K6 752 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
SHC1-202ENST00000368445 HS6ST2Q96MM7 605 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 TNFRSF13CQ96RJ3 184 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 CFL2Q9Y281 166 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 CDH10Q9Y6N8 788 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 AHCTF1Q8WYP5 2266 aa12.79□□□□□ -0.36
SHC1-202ENST00000368445 A0A087WV62 115 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 RIIAD1A6NNX1 92 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 BLOC1S5-TXNDC5H3BN57 136 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 CASKO14936 926 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 BRINP1O60477 761 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 FPR3P25089 353 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 CAV3P56539 151 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 CDK5Q00535 292 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.78□□□□□ -0.36
SHC1-202ENST00000368445 C14orf28Q4W4Y0 310 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 ARHGAP40Q5TG30 622 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 DCDC5Q6ZRR9 648 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 PROKR2Q8NFJ6 384 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 TSLPQ969D9 159 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 SENP5Q96HI0 755 aaPredicted RBP12.78□□□□□ -0.36
SHC1-202ENST00000368445 ADOQ96SZ5 270 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 NELL2Q99435 816 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 SLC25A19Q9HC21 320 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 ABCB9Q9NP78 766 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 CUTCQ9NTM9 273 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 C14orf119Q9NWQ9 140 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 ERVK13-1Q9NX77 482 aa12.78□□□□□ -0.36
SHC1-202ENST00000368445 PRR23D1E9PI22 279 aaPredicted RBP12.78□□□□□ -0.36
SHC1-202ENST00000368445 SLC30A4O14863 429 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms