RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 VPS29Q9UBQ0 182 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PISDQ9UG56 409 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NDRG4Q9ULP0 352 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PQ45 241 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PQY0 241 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 BLKP51451 505 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PAFAH1B3Q15102 231 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ALG10BQ5I7T1 473 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PODNL1Q6PEZ8 512 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NAT8LQ8N9F0 302 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MED8Q96G25 268 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MECRQ9BV79 373 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 METTL15A6NJ78 407 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CCL22O00626 93 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RLN1P04808 185 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PIRTP0C851 137 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 KCNC1P48547 511 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TFAP2EQ6VUC0 442 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 GALNT16Q8N428 558 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 LMF2Q9BU23 707 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MYOZ1Q9NP98 299 aaPredicted RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PPQ1 181 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TYMSP04818 313 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NCK1P16333 377 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 OR51S1Q8NGJ8 323 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PDE7BQ9NP56 450 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RFXAPO00287 272 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 STC1P52823 247 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CDK3Q00526 305 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF763Q0D2J5 394 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SGCGQ13326 291 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MED27Q6P2C8 311 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 BRIX1Q8TDN6 353 aaKnown RBP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ACER1Q8TDN7 264 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 TGM7Q96PF1 710 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 SULT4A1Q9BR01 284 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.55□□□□□ -1.84
SYNE1-207ENST00000367255 FAM206AQ9NX38 181 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 C2CD4BA6NLJ0 364 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF208O43345 1280 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 PTNP21246 168 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 EPHA1P21709 976 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 ADRA1BP35368 520 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 NDUFV1P49821 464 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 EXT1Q16394 746 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 RABEPKQ7Z6M1 372 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 CREBZFQ9NS37 354 aa3.55□□□□□ -1.84
SYNE1-207ENST00000367255 MSI1O43347 362 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FADS1O60427 444 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HLA-DQA2P01906 255 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 IDH3GP51553 393 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RAB35Q15286 201 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM183BQ1AE95 376 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 STEAP2Q8NFT2 490 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF675Q8TD23 568 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BOD1Q96IK1 185 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ACBD6Q9BR61 282 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GHITMQ9H3K2 345 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BRD7Q9NPI1 651 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 NCDNQ9UBB6 729 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HRH3Q9Y5N1 445 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 COL1A1P02452 1464 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PRSS23O95084 383 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TK1P04183 234 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BMI1P35226 326 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 AQP4P55087 323 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PHF19Q5T6S3 580 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 C17orf64Q86WR6 236 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 UMODL1-AS1Q8N2C9 162 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ESX1Q8N693 406 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BPIFA2Q96DR5 249 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SEC11CQ9BY50 192 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 DCAF16Q9NXF7 216 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SH3BGRL2Q9UJC5 107 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SLC35A3Q9Y2D2 325 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 F5H5P2 479 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 ERAL1O75616 437 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 RRASP10301 218 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 BCKDHAP12694 445 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MAXP61244 160 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SMN1Q16637 294 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PGGHGQ32M88 737 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM64Q6YI46 380 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GKN2Q86XP6 184 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR6M1Q8NGM8 313 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 FAM151AQ8WW52 585 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 PMCHL2Q9BQD1 86 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 J3QW42 95 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GJB3O75712 270 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CLDN8P56748 225 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 GINS1Q14691 196 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 CRTC2Q53ET0 693 aaPredicted RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 MFSD7Q6UXD7 560 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 HMGN2P46Q86SG4 172 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SORBS1Q9BX66 1292 aaKnown RBP3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TOLLIPQ9H0E2 274 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 SH3BGRL3Q9H299 93 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 TCAPO15273 167 aa3.54□□□□□ -1.84
SYNE1-207ENST00000367255 OR2T7P0C7T2 308 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms