RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 FAM156AQ8NDB6 213 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 OR6S1Q8NH40 331 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 IL31RAQ8NI17 732 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 TRUB1Q8WWH5 349 aaKnown RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PWWP2AQ96N64 755 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
SYNE1-206ENST00000367253 OR2M2Q96R28 347 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 OR14A2Q96R54 314 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 APOOQ9BUR5 198 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 PLEK2Q9NYT0 353 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 TAC3Q9UHF0 121 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 ACTL7AQ9Y615 435 aa8.16□□□□□ -1.1
SYNE1-206ENST00000367253 ARHGAP33O14559 1287 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 GKN3PP0CG01 181 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 CYB561P49447 251 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 OR12D2P58182 307 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 FXYD6P3P58550 94 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 PCBD1P61457 104 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 HMGCS1Q01581 520 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 PMS2P3Q13401 168 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ODF4Q2M2E3 257 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 DPY19L1Q2PZI1 675 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 LRRC37A5PQ49AS3 106 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 DCDC5Q6ZRR9 648 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 SLC38A6Q8IZM9 456 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 OR9A1PQ8NGU1 263 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 JMJD8Q96S16 334 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 MACROD1Q9BQ69 325 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 TXLNGYQ9BZA5 131 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 C12orf10Q9HB07 376 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 TXNRD2Q9NNW7 524 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 IL20RAQ9UHF4 553 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 OAZ3Q9UMX2 235 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 HS3ST3A1Q9Y663 406 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 LRP5O75197 1615 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 A0A087X0M5 115 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 A0A0U1RQK1 487 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 A0A1B0GX30 115 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 A0A1W2PRB8 838 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 HCRTR2O43614 444 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 SLC19A2O60779 497 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 LILRB5O75023 590 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ADAM11O75078 769 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 LEFTY1O75610 366 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 CNOT4O95628 575 aaKnown RBP8.15□□□□□ -1.1
SYNE1-206ENST00000367253 IFNA5P01569 189 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 CTHP32929 405 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 SLC19A1P41440 591 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 RPL29P47914 159 aaKnown RBP8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF684Q5T5D7 378 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 NPNTQ6UXI9 565 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF813Q6ZN06 617 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 FAM185AQ8N0U4 392 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 OR10G2Q8NGC3 310 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 SPPL3Q8TCT6 385 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 DYNC2LI1Q8TCX1 351 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 PAQR8Q8TEZ7 354 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ARL11Q969Q4 196 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ISOC1Q96CN7 298 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 ZNF251Q9BRH9 671 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 TPT1P8Q9HAU6 139 aa8.15□□□□□ -1.1
SYNE1-206ENST00000367253 MDFIC2A0A1B0GVS7 189 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 CILPO75339 1184 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 MNX1P50219 401 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 TARDBPQ13148 414 aaKnown RBP eCLIP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 GNMTQ14749 295 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 CLEC2AQ6UVW9 174 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 DPY19L4Q7Z388 723 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 CMASQ8NFW8 434 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 UBTD2Q8WUN7 234 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 ASB9Q96DX5 294 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 CDKN2AIPNLQ96HQ2 116 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 PIP5K1AQ99755 562 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 ATF6BQ99941 703 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 MAP4K5Q9Y4K4 846 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 A0A0G2JMP0 313 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 A0A0J9YY10 115 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 TMEM150BA6NC51 233 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 THBS1P07996 1170 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 FPR2P25090 351 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 PPP5CP53041 499 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 CHRNEQ04844 493 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 BCL2A1Q16548 175 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 FAM182AQ5T1J6 154 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 PGAP1Q75T13 922 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 SSX8Q7RTT4 187 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 PIWIL3Q7Z3Z3 882 aaKnown RBP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 GTPBP8Q8N3Z3 284 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 GLB1L3Q8NCI6 653 aaPredicted RBP8.15□□□□□ -1.11
SYNE1-206ENST00000367253 OR4M2Q8NGB6 313 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 NSMAFQ92636 917 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 MGAT4CQ9UBM8 478 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 PROCRQ9UNN8 238 aa8.15□□□□□ -1.11
SYNE1-206ENST00000367253 hCG_1818297A0A087WSY0 165 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 BCAS1O75363 584 aaPredicted RBP8.14□□□□□ -1.11
SYNE1-206ENST00000367253 GJA4P35212 333 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 EMP1P54849 157 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 MAMLD1Q13495 774 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 KIR2DS3Q14952 304 aa8.14□□□□□ -1.11
SYNE1-206ENST00000367253 RAB35Q15286 201 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms