RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 CPNE4Q96A23 557 aaPredicted RBP13.29□□□□□ -0.28
CTSD-202ENST00000367196 C16orf58Q96GQ5 468 aa13.29□□□□□ -0.28
CTSD-202ENST00000367196 ZC3HAV1LQ96H79 300 aaKnown RBP13.29□□□□□ -0.28
CTSD-202ENST00000367196 ADGRG7Q96K78 797 aa13.29□□□□□ -0.28
CTSD-202ENST00000367196 KLHL15Q96M94 604 aa13.29□□□□□ -0.28
CTSD-202ENST00000367196 ROPN1BQ9BZX4 212 aaPredicted RBP13.29□□□□□ -0.28
CTSD-202ENST00000367196 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
CTSD-202ENST00000367196 ROPN1Q9HAT0 212 aaPredicted RBP13.29□□□□□ -0.28
CTSD-202ENST00000367196 LGALS13Q9UHV8 139 aa13.29□□□□□ -0.28
CTSD-202ENST00000367196 VPS13CQ709C8 3753 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 TMEM233B4DJY2 109 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 TNFSF11O14788 317 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 SIAH2O43255 324 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 TMCC2O75069 709 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 PEX11AO75192 247 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 PRPS1L1P21108 318 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 PSMA4P25789 261 aaKnown RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 SLC6A8P48029 635 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 CCT3P49368 545 aaKnown RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 UGT3A2Q3SY77 523 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 EXOSC6Q5RKV6 272 aaKnown RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 CCNJQ5T5M9 372 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 LILRA2Q8N149 483 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 LRRN4CLQ8ND94 238 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 OR7A2PQ8NGA2 310 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 CDS1Q92903 461 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 ARL8AQ96BM9 186 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 TACO1Q9BSH4 297 aaKnown RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 MECRQ9BV79 373 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 BHLHE41Q9C0J9 482 aaPredicted RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 TMEM185BQ9H7F4 350 aa13.28□□□□□ -0.28
CTSD-202ENST00000367196 ZNF395Q9H8N7 513 aaPredicted RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 SIRT3Q9NTG7 399 aaPredicted RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 GPC6Q9Y625 555 aaPredicted RBP13.28□□□□□ -0.28
CTSD-202ENST00000367196 SLU7O95391 586 aaKnown RBP13.27□□□□□ -0.29
CTSD-202ENST00000367196 LINGO3P0C6S8 592 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 HOXB4P17483 251 aaPredicted RBP13.27□□□□□ -0.29
CTSD-202ENST00000367196 AGTR1P30556 359 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 P2RX1P51575 399 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 CARD18P57730 90 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 ZNF117Q03924 483 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 PTGR1Q14914 329 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 CD226Q15762 336 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 TMEM201Q5SNT2 666 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 DCST2Q5T1A1 773 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 TCP10LQ8TDR4 215 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 OSTF1Q92882 214 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 OTUB1Q96FW1 271 aaPredicted RBP13.27□□□□□ -0.29
CTSD-202ENST00000367196 MARK4Q96L34 752 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 ZIM3Q96PE6 472 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 C1orf50Q9BV19 199 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
CTSD-202ENST00000367196 GP6Q9HCN6 339 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 GPR52Q9Y2T5 361 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 ACTL7BQ9Y614 415 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 DSCAMO60469 2012 aa13.27□□□□□ -0.29
CTSD-202ENST00000367196 A0A0J9YW62 118 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 DUXAA6NLW8 204 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 GTPBP1O00178 669 aaKnown RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 CFLARO15519 480 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 SPAG7O75391 227 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 SKAP2O75563 359 aaPredicted RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 AK1P00568 194 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 LAMP1P11279 417 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 PSMB1P20618 241 aaKnown RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 EFNA1P20827 205 aaPredicted RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 ATP12AP54707 1039 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 FOXF1Q12946 379 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ZNF239Q16600 458 aaKnown RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 C6orf136Q5SQH8 315 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 IL23RQ5VWK5 629 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ANKRD34AQ69YU3 496 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 CLEC9AQ6UXN8 241 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ZCCHC23Q6ZST2 131 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 PLEKHM3Q6ZWE6 761 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ZAR1Q86SH2 424 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 KRTAP1-3Q8IUG1 177 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ZNF614Q8N883 585 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 TOR1AIP2Q8NFQ8 470 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 STEAP2Q8NFT2 490 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 OR2W6PQ8NHA6 318 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 PPP1R14CQ8TAE6 165 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 RNF128Q8TEB7 428 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 TUBGCP3Q96CW5 907 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 COQ8BQ96D53 544 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 BDH2Q9BUT1 245 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 DUSP26Q9BV47 211 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 HDHD5Q9BXW7 423 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ABCA2Q9BZC7 2435 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 ACTR6Q9GZN1 396 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 CXorf56Q9H5V9 222 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 FBXO34Q9NWN3 711 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 NOP53Q9NZM5 478 aaKnown RBP13.26□□□□□ -0.29
CTSD-202ENST00000367196 SLC17A7Q9P2U7 560 aa13.26□□□□□ -0.29
CTSD-202ENST00000367196 RAI1Q7Z5J4 1906 aaPredicted RBP13.25□□□□□ -0.29
CTSD-202ENST00000367196 NIPBLQ6KC79 2804 aaeCLIP13.25□□□□□ -0.29
CTSD-202ENST00000367196 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.25□□□□□ -0.29
CTSD-202ENST00000367196 C6orf47O95873 294 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms