RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 IMPA1P29218 277 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SOX2P48431 317 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GP2P55259 537 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 RBMS2Q15434 407 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 CHRFAM7AQ494W8 412 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 ZNF878C9JN71 531 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 H7C417 338 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 TAPBPO15533 448 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 HSPA12AO43301 675 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 B4GALT2O60909 372 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 HERV-K104P61576 105 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 FAPQ12884 760 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 GNMTQ14749 295 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 EGLN2Q96KS0 407 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 SLCO5A1Q9H2Y9 848 aa11.09□□□□□ -0.63
CDC42BPA-202ENST00000366764 MYADML2A6NDP7 307 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CTSAP10619 480 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CD34P28906 385 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SSTR4P31391 388 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 GXYLT1Q4G148 440 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 ESCO2Q56NI9 601 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CD276Q5ZPR3 534 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 TMEM64Q6YI46 380 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 HSD11B1LQ7Z5J1 315 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 UBBP0CG47 229 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 UBCP0CG48 685 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 POLR2IP36954 125 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 RPS27AP62979 156 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 UBA52P62987 128 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 B3GNT2Q9NY97 397 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC7A7Q9UM01 511 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 MAN2A2P49641 1150 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 GRIN2CQ14957 1233 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CDNFQ49AH0 187 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 LIMS2Q7Z4I7 341 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 YIPF6Q96EC8 236 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CLEC4EQ9ULY5 219 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 AXIN1O15169 862 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 HCRTR2O43614 444 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 HSD11B2P80365 405 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 MC1RQ01726 317 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 PCGF3Q3KNV8 242 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 FAM26EQ8N5C1 309 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR10A4Q9H209 315 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 HEMK1Q9Y5R4 338 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 ARPC5O15511 151 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SPARCP09486 303 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SNRPD2P62316 118 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CTU2Q2VPK5 515 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 HSF5Q4G112 596 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 KCTD9Q7L273 389 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 ARL14Q8N4G2 192 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 PDFQ9HBH1 243 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 ABI3Q9P2A4 366 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 GLO1Q04760 184 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 TBPL2Q6SJ96 375 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SPRYD4Q8WW59 207 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SERTAD3Q9UJW9 196 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 MCEMP1Q8IX19 187 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR52D1Q9H346 318 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 CAMK2AQ9UQM7 478 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 TGM5O43548 720 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 SBK3P0C264 359 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR2T7P0C7T2 308 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 PRR35P0CG20 571 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 NPR2P20594 1047 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 PSMB1P20618 241 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 BDH1Q02338 343 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 GPM6BQ13491 265 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 LIPIQ6XZB0 460 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR2L8Q8NGY9 312 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR2T27Q8NH04 317 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR8S1Q8NH09 359 aa11.08□□□□□ -0.64
CDC42BPA-202ENST00000366764 COL11A2P13942 1736 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 SLC22A5O76082 557 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 TIMP2P16035 220 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RAD9AQ99638 391 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 DPYSL5Q9BPU6 564 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 ALOXE3Q9BYJ1 711 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 ZNF281Q9Y2X9 895 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 PSMD9O00233 223 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 GDI1P31150 447 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 PTH2RP49190 550 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 AFF1P51825 1210 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 MBOAT2Q6ZWT7 520 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 OR4K13Q8NH42 304 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 A0A0D9SG52 128 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 A6NIZ1 184 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 C1QBP02746 253 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 AMY2AP04746 511 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 TAS2R19P59542 299 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RAP1BP61224 184 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 RAP1AP62834 184 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 PRDX1Q06830 199 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 CST6Q15828 149 aa11.07□□□□□ -0.64
CDC42BPA-202ENST00000366764 CLVS2Q5SYC1 327 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms