RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NR5A2O00482 541 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 IGLV1-44P01699 117 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 TPBGLP0DKB5 382 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ETS1P14921 441 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 TNNI1P19237 187 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPX3P22352 226 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ACP1P24666 158 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ATP5C1P36542 298 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 CD86P42081 329 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 NDST1P52848 882 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 GEMP55040 296 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 RPS14P62263 151 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 SEMG2Q02383 582 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 GAMTQ14353 236 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM187Q14656 261 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR1C1Q15619 314 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 WSCD2Q2TBF2 565 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZFP69Q49AA0 526 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCDC40Q4G0X9 1142 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR6B2Q6IFH4 312 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 SPOPLQ6IQ16 392 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 SCARA5Q6ZMJ2 495 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 WDR88Q6ZMY6 472 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 BHLHA9Q7RTU4 235 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ELMOD2Q8IZ81 293 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 C8orf46Q8TAG6 207 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 WFDC5Q8TCV5 224 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 NDRG1Q92597 394 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 ESAMQ96AP7 390 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 BIRC7Q96CA5 298 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 SMARCD1Q96GM5 515 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 NSMCE2Q96MF7 247 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPR137Q96N19 417 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 DUX3Q96PT4 197 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM111AQ96PZ2 611 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 XPO6Q96QU8 1125 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 KRT12Q99456 494 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 OVOL2Q9BRP0 275 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 NUP58Q9BVL2 599 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 GANQ9H2C0 597 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 PRSS16Q9NQE7 514 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM49BQ9NUQ9 324 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 MED17Q9NVC6 651 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM153AQ9UHL3 310 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 MRTO4Q9UKD2 239 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 SCML2Q9UQR0 700 aa4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 MRPS2Q9Y399 296 aaKnown RBP4.73□□□□□ -1.65
RNU4-39P-201ENST00000362455 PTPRDP23468 1912 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 PLXNB3Q9ULL4 1909 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 A0A1B0GTQ1 180 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 A8MU76 341 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 EEF2KO00418 725 aaKnown RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCSO14618 274 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZFAND5O76080 213 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 TXNDC12O95881 172 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 MT-ATP6P00846 226 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 LYNP07948 512 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCNA2P20248 432 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 PRKACGP22612 351 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 GLRA1P23415 457 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 EDNRAP25101 427 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 ADORA2BP29275 332 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 OXTRP30559 389 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 ACADVLP49748 655 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 SGSHP51688 502 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 TNNC1P63316 161 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCZ1BP86790 482 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCZ1P86791 482 aaPredicted RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 DHODHQ02127 395 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM189A2Q15884 450 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 KLHL22Q53GT1 634 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 TAF1BQ53T94 588 aaPredicted RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 C10orf120Q5SQS8 335 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 WLSQ5T9L3 541 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 NKAIN2Q5VXU1 208 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 TAF8Q7Z7C8 310 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 ERICH1Q86X53 443 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 NELFCDQ8IXH7 590 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 KDM8Q8N371 416 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR9Q2Q8NGE9 314 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR6M1Q8NGM8 313 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR2T3Q8NH03 318 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF519Q8TB69 540 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 SLCO2A1Q92959 643 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 CNRIP1Q96F85 164 aaPredicted RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 USP28Q96RU2 1077 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 SPAG8Q99932 426 aaPredicted RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 MED10Q9BTT4 135 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 FUNDC2Q9BWH2 189 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 WWP1Q9H0M0 922 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 LHX5Q9H2C1 402 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 MED20Q9H944 212 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 DMAC2Q9NW81 257 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 TECRQ9NZ01 308 aaKnown RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 COPS7AQ9UBW8 275 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 KLK11Q9UBX7 282 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 KIF3AQ9Y496 699 aa4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 PDCD11Q14690 1871 aaKnown RBP4.72□□□□□ -1.65
RNU4-39P-201ENST00000362455 PIEZO2Q9H5I5 2752 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms