RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 CCT7Q99832 543 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 APOL2Q9BQE5 337 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 ELOVL4Q9GZR5 314 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 VCX2Q9H322 139 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 PPDPFQ9H3Y8 114 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 PNO1Q9NRX1 252 aaKnown RBP2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 CUTCQ9NTM9 273 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC2A6Q9UGQ3 507 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 RASD1Q9Y272 281 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 CSAG2Q9Y5P2 127 aa2.88□□□□□ -1.95
RNU6-28P-201ENST00000362378 POGZQ7Z3K3 1410 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 A0A087WWV3 80 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 METTL21EPA6NDL7 271 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 E9PLD3 99 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 LATO43561 262 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 NUDT21O43809 227 aaKnown RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF354AO60765 605 aaPredicted RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SURF6O75683 361 aaKnown RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 PALMO75781 387 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 CA1P00915 261 aaPredicted RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 IGHV1-2P23083 117 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 XCR1P46094 333 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 IST1P53990 364 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OTUD4Q01804 1114 aaKnown RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 ST3GAL3Q11203 375 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 MXD4Q14582 209 aaPredicted RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 GANABQ14697 944 aaKnown RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 EXOC3L2Q2M3D2 409 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 MAJINQ3KP22 176 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC22A6Q4U2R8 563 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 RNLSQ5VYX0 342 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 WSCD1Q658N2 575 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OLFML2AQ68BL7 652 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 UFSP1Q6NVU6 142 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SYT10Q6XYQ8 523 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SERINC5Q86VE9 423 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC38A6Q8IZM9 456 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 ZNF485Q8NCK3 441 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 STXBP6Q8NFX7 210 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR2T33Q8NG76 320 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR4D5Q8NGN0 318 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR1F12Q8NHA8 337 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 ARNTL2Q8WYA1 636 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 N4BP2L2Q92802 583 aaPredicted RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 BADQ92934 168 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 PELI1Q96FA3 418 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 OR5B2Q96R09 309 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SECISBP2Q96T21 854 aaKnown RBP2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 TUBGCP2Q9BSJ2 902 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 DPH7Q9BTV6 452 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 EDEM2Q9BV94 578 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 UBXN6Q9BZV1 441 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 UFSP2Q9NUQ7 469 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SMOXQ9NWM0 555 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 SIGLEC8Q9NYZ4 499 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 DPM3Q9P2X0 92 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 PCSK1NQ9UHG2 260 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 MAD1L1Q9Y6D9 718 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 PNPLA6Q8IY17 1366 aa2.87□□□□□ -1.95
RNU6-28P-201ENST00000362378 TRAV26-1A0A087WT03 109 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 IGHV3-35A0A0C4DH35 117 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 IGHV2-70DA0A0C4DH43 119 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 PP2D1A8MPX8 630 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 B4DXG7 233 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 H3BMQ9 156 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 K7ENP7 123 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 CDX4O14627 284 aaPredicted RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 TAPBPO15533 448 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 CRLF1O75462 422 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 SCRG1O75711 98 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 CABYRO75952 493 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 NOL4O94818 638 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 DUSP14O95147 198 aaKnown RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 TBX6O95947 436 aaPredicted RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 PGAM2P15259 253 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 GCFC2P16383 781 aaKnown RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 SERPINA2P20848 420 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 GATA2P23769 480 aaPredicted RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 LAP3P28838 519 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 CD80P33681 288 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 NF2P35240 595 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 MAGEA9P43362 315 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 P2RY1P47900 373 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 FNTAP49354 379 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 EFNA3P52797 238 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 LIM2P55344 173 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 SLC8A3P57103 927 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 TGIF1Q15583 401 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 Q1RN00 199 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 GLYR1Q49A26 553 aaPredicted RBP2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 EIPR1Q53HC9 387 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 C10orf120Q5SQS8 335 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 C2orf66Q6UXQ4 117 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 NLRP9Q7RTR0 991 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 C16orf62Q7Z3J2 963 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 MOB3BQ86TA1 216 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 MARCH9Q86YJ5 346 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 VSTM4Q8IW00 320 aa2.86□□□□□ -1.95
RNU6-28P-201ENST00000362378 NAXDQ8IW45 347 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms