RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 AMBRA1Q9C0C7 1298 aa18.91■□□□□ 0.62
SHISA4-201ENST00000362011 ING2Q9H160 280 aa18.91■□□□□ 0.62
SHISA4-201ENST00000362011 RLIMQ9NVW2 624 aa18.91■□□□□ 0.62
SHISA4-201ENST00000362011 HPF1Q9NWY4 346 aa18.91■□□□□ 0.62
SHISA4-201ENST00000362011 PRAMEF25A6NGN4 478 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 ENDOUP21128 410 aaKnown RBP18.9■□□□□ 0.62
SHISA4-201ENST00000362011 RGS8P57771 180 aaPredicted RBP18.9■□□□□ 0.62
SHISA4-201ENST00000362011 DEFB109BQ30KR1 87 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 FNDC7Q5VTL7 733 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 APOOLQ6UXV4 268 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 LACC1Q8IV20 430 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 GPALPP1Q8IXQ4 340 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 BEST3Q8N1M1 668 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 GATSQ8NAP1 163 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 OR10G3Q8NGC4 313 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 PHOSPHO1Q8TCT1 267 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 RNF138Q8WVD3 245 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 CNOT9Q92600 299 aaKnown RBP18.9■□□□□ 0.62
SHISA4-201ENST00000362011 PKP2Q99959 881 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 C6orf203Q9P0P8 240 aaPredicted RBP18.9■□□□□ 0.62
SHISA4-201ENST00000362011 ENPP4Q9Y6X5 453 aa18.9■□□□□ 0.62
SHISA4-201ENST00000362011 GTPBP1O00178 669 aaKnown RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 FRS3O43559 492 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 NDUFB5O43674 189 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 SCO2O43819 266 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 DEAF1O75398 565 aaPredicted RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 DNAJB5O75953 348 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 CST1P01037 141 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 UBL4AP11441 157 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 ST13P50502 369 aaKnown RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 DEF8Q6ZN54 512 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 CYP4Z1Q86W10 505 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 OR6T1Q8NGN1 323 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 GRHL3Q8TE85 626 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 EXTL1Q92935 676 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 SLC35B4Q969S0 331 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF300Q96RE9 604 aaPredicted RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF347Q96SE7 839 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 SECISBP2Q96T21 854 aaKnown RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 WFDC6Q9BQY6 131 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 METTL7AQ9H8H3 244 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 DNAJB12Q9NXW2 375 aaKnown RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 GPR83Q9NYM4 423 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 STMN3Q9NZ72 180 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 NDUFAF4Q9P032 175 aa18.89■□□□□ 0.61
SHISA4-201ENST00000362011 NKX1-2Q9UD57 310 aaPredicted RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 FAM32AQ9Y421 112 aaKnown RBP18.89■□□□□ 0.61
SHISA4-201ENST00000362011 A6NL46 340 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 AP3D1O14617 1153 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 LDLRP01130 860 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 SFTPCP11686 197 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 CASRP41180 1078 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 HLCSP50747 726 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 PLAURQ03405 335 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 CD226Q15762 336 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 ATP6AP1Q15904 470 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 IQCCQ4KMZ1 466 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 HMBOX1Q6NT76 420 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 RTL4Q6ZR62 310 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF550Q7Z398 422 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 TSEN54Q7Z6J9 526 aaKnown RBP18.88■□□□□ 0.61
SHISA4-201ENST00000362011 MARCH3Q86UD3 253 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 RBM45Q8IUH3 476 aaKnown RBP18.88■□□□□ 0.61
SHISA4-201ENST00000362011 MISPQ8IVT2 679 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF440Q8IYI8 595 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 LILRA2Q8N149 483 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 FAM71CQ8NEG0 241 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 AGPAT4Q9NRZ5 378 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 KLRF1Q9NZS2 232 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 DNAJB9Q9UBS3 223 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 RIMS3Q9UJD0 308 aa18.88■□□□□ 0.61
SHISA4-201ENST00000362011 TNRC6AQ8NDV7 1962 aaKnown RBP18.88■□□□□ 0.61
SHISA4-201ENST00000362011 CDK2AP1O14519 115 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 GNGT2O14610 69 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 CLOCKO15516 846 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 ZNF264O43296 627 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 BCAS1O75363 584 aaPredicted RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 CYP7B1O75881 506 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 DIRAS1O95057 198 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 ANGPTL1O95841 491 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 UBTFL6P0CB48 400 aaPredicted RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 RHCEP18577 417 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 SLC34A1Q06495 639 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 SRSF1Q07955 248 aaKnown RBP eCLIP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 NPTX1Q15818 432 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 NDUFAF6Q330K2 333 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 AGAP7PQ5VUJ5 663 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 OR2T5Q6IEZ7 315 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 TMEM81Q6P7N7 255 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 AMIGO2Q86SJ2 522 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 RANBP3LQ86VV4 465 aaPredicted RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 APLFQ8IW19 511 aaPredicted RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 CYP4Z2PQ8N1L4 340 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 OR2T29Q8NH02 315 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 AGAP4Q96P64 663 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 OSBPL11Q9BXB4 747 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 RASSF4Q9H2L5 321 aa18.87■□□□□ 0.61
SHISA4-201ENST00000362011 EXOSC3Q9NQT5 275 aaKnown RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 TESQ9UGI8 421 aaKnown RBP18.87■□□□□ 0.61
SHISA4-201ENST00000362011 CHCHD2Q9Y6H1 151 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms