RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 COPZ2Q9P299 210 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 GPR160Q9UJ42 338 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 hCG_1807616A0A1W2PRN6 198 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR5K3A6NET4 321 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PCDH17O14917 1159 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 LCATP04180 440 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ADH7P40394 386 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PITPNBP48739 271 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 HSD17B7P56937 341 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PSMA6P60900 246 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 ABHD17CQ6PCB6 329 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PGM2L1Q6PCE3 622 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 Q8N402 240 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 DNAJA3Q96EY1 480 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 RADILQ96JH8 1075 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZNF160Q9HCG1 818 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PRDM9Q9NQV7 894 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 RPH3AQ9Y2J0 694 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 GPR52Q9Y2T5 361 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 J3QRK9 145 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 IGHG1P01857 330 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 NPPBP16860 134 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 GRPRP30550 384 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 EIF2B1Q14232 305 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 ENTPD8Q5MY95 495 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 FAM205BPQ63HN1 556 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 FRMPD2BQ6IN97 320 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 KCTD20Q7Z5Y7 419 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR1E3Q8WZA6 343 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR52D1Q9H346 318 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 ALG5Q9Y673 324 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 DDX60LQ5H9U9 1706 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 CD8B2A6NJW9 211 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 CD8BP10966 210 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 MAGEA12P43365 314 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 SSR4P51571 173 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PRKXP51817 358 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 EEF1A2Q05639 463 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 SYPL1Q16563 259 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 PYCR3Q53H96 274 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 Q6ZNB5 142 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 IQCF1Q8N6M8 205 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 LCORQ96JN0 433 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR4K3Q96R72 315 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 CCNL2Q96S94 520 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 UTP23Q9BRU9 249 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 ENKD1Q9H0I2 346 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 MED17Q9NVC6 651 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 HIF3AQ9Y2N7 669 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 LAMB1P07942 1786 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 TAF1P21675 1872 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ERP29P30040 261 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 GCH1P30793 250 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 MAP2K3P46734 347 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZNF791Q3KP31 576 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 MRPL21Q7Z2W9 205 aaKnown RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 CMIPQ8IY22 773 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 SPEM1Q8N4L4 309 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR6C1Q96RD1 312 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZNF587Q96SQ5 575 aaPredicted RBP12.61□□□□□ -0.39
LDB3-202ENST00000361373 ZDHHC5Q9C0B5 715 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 SAP130Q9H0E3 1048 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 IL21Q9HBE4 155 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 FGF22Q9HCT0 170 aa12.61□□□□□ -0.39
LDB3-202ENST00000361373 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 OR6C70A6NIJ9 312 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 FRS3O43559 492 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PTHP01270 115 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 S100A10P60903 97 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SNTB2Q13425 540 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 CCDC32Q9BV29 185 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 TMEM225BP0DP42 221 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ZNF16P17020 682 aaPredicted RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 FXYD6P3P58550 94 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 C17orf67Q0P5P2 114 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 TSPAN31Q12999 210 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PDE7AQ13946 482 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 RNASE10Q5GAN6 216 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 SLC48A1Q6P1K1 146 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 TMEM205Q6UW68 189 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 Q6ZSR9 355 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SSX6Q7RTT6 188 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SLC43A2Q8N370 569 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 DEFB123Q8N688 67 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 OR5L1Q8NGL2 311 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 SLC2A12Q8TD20 617 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ZFAND2BQ8WV99 257 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 ASB17Q8WXJ9 295 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 NEURL3Q96EH8 262 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 DMRTB1Q96MA1 342 aa12.6□□□□□ -0.39
LDB3-202ENST00000361373 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
LDB3-202ENST00000361373 HCAR1Q9BXC0 346 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms