RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 PLEKHM1Q9Y4G2 1056 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 C12orf71A8MTZ7 269 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 NME4O00746 187 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SLC16A7O60669 478 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 ZFAND5O76080 213 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 CAPN3P20807 821 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 POU3F1Q03052 451 aaPredicted RBP16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SHHQ15465 462 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 CPXM2Q8N436 756 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 E7ESA3 106 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 PPP6CO00743 305 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 FAM189A1O60320 539 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 OSMP13725 252 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SLC7A9P82251 487 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 HCAR1Q9BXC0 346 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 GSTO2Q9H4Y5 243 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 TM7SF3Q9NS93 570 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 CITO14578 2027 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SDC1P18827 310 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 TDGQ13569 410 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SF3B4Q15427 424 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL4A2-201ENST00000360467 PARM1Q6UWI2 310 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 ARL5BQ96KC2 179 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 INIPQ9NRY2 104 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 A6NIN4 97 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 HPRP00739 348 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 PTAFRP25105 342 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 AQP2P41181 271 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 CLDN17P56750 224 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF423Q2M1K9 1284 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 CHPT1Q8WUD6 406 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 UTP23Q9BRU9 249 aaKnown RBP16.06■□□□□ 0.16
COL4A2-201ENST00000360467 FOXQ1Q9C009 403 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 SMOXQ9NWM0 555 aa16.06■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF223Q9UK11 482 aaPredicted RBP16.06■□□□□ 0.16
COL4A2-201ENST00000360467 JRKO75564 520 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 GABBR2O75899 941 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 F3P13726 295 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF44P15621 663 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 NCS1P62166 190 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 GPR50Q13585 617 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF585AQ6P3V2 769 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 NIPAL3Q6P499 406 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 RRP8O43159 456 aaKnown RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 TIMM8AO60220 97 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MRPL33O75394 65 aaKnown RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 TMEM176BQ3YBM2 270 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 RNASE10Q5GAN6 216 aaKnown RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 TMEM150AQ86TG1 271 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 OR1S1Q8NH92 325 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MYADMQ96S97 322 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF355PQ9NSJ1 428 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 A6NIZ1 184 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 CXCR4P61073 352 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 RAP1BP61224 184 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 RAP1AP62834 184 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 SELENOWP63302 87 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 PXKQ7Z7A4 578 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MAFIPQ8WZ33 124 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 PGAP3Q96FM1 320 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 QRSL1Q9H0R6 528 aaKnown RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 CD93Q9NPY3 652 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 FAM86C1Q9NVL1 165 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 LHX3Q9UBR4 397 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 BOKQ9UMX3 212 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 CRYBG1Q9Y4K1 1723 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 FAM183AA6NL82 134 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MAP2K3P46734 347 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ZNF480Q8WV37 535 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.05■□□□□ 0.16
COL4A2-201ENST00000360467 ANKRD34BA5PLL1 514 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 SLC22A6Q4U2R8 563 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 SFXN5Q8TD22 340 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 CREB3L1Q96BA8 519 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MUCL1Q96DR8 90 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 PHOX2BQ99453 314 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 MYNNQ9NPC7 610 aa16.05■□□□□ 0.16
COL4A2-201ENST00000360467 AFF3P51826 1226 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 MRPS21P82921 87 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 RBM12BQ8IXT5 1001 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SSX3Q99909 188 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 RNASET2O00584 256 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 PRICKLE3O43900 615 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SUSD5O60279 629 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SSTR4P31391 388 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 CAV2P51636 162 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SPOCK1Q08629 439 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SNTB2Q13425 540 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SIX1Q15475 284 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 OR1Q1Q15612 314 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 LTB4RQ15722 352 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 RELL1Q8IUW5 271 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 NDNFQ8TB73 568 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 MAELQ96JY0 434 aaKnown RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 SLC22A12Q96S37 553 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 DPCDQ9BVM2 203 aaPredicted RBP16.04■□□□□ 0.16
COL4A2-201ENST00000360467 KLHL13Q9P2N7 655 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 RPH3ALQ9UNE2 315 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 PCDHGA7Q9Y5G6 932 aa16.04■□□□□ 0.16
COL4A2-201ENST00000360467 ENPP4Q9Y6X5 453 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms