RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CDADC1Q9BWV3 514 aa12.87□□□□□ -0.35
CSNK1E-201ENST00000359867 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
CSNK1E-201ENST00000359867 TOR4AQ9NXH8 423 aa12.87□□□□□ -0.35
CSNK1E-201ENST00000359867 SEMA5BQ9P283 1151 aa12.87□□□□□ -0.35
CSNK1E-201ENST00000359867 A0A1W2PRQ8 180 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 TMEM150CB9EJG8 249 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PLOD3O60568 738 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SEMA7AO75326 666 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PTHP01270 115 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 GASTP01350 101 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PRKACAP17612 351 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 ELAVL4P26378 380 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SHC2P98077 582 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 ARHGAP11BQ3KRB8 267 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PIP4P1Q86T03 277 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 LACC1Q8IV20 430 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 NLGN4XQ8N0W4 816 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SHISA5Q8N114 240 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 D2HGDHQ8N465 521 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 IPCEF1Q8WWN9 437 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 GIMAP1Q8WWP7 306 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 FUZQ9BT04 418 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 OR2B2Q9GZK3 357 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SPRTNQ9H040 489 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 MMP27Q9H306 513 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 NARFLQ9H6Q4 476 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 A4GNTQ9UNA3 340 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 NINQ8N4C6 2090 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 TRBV4-1A0A0J9YWV2 114 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 BLACEA4D250 179 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 FGF17O60258 216 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 EPPINO95925 133 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PRKAR1BP31321 381 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 TRIP6Q15654 476 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 ZNF311Q5JNZ3 666 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 EXOSC6Q5RKV6 272 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 RBM45Q8IUH3 476 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 SLC16A11Q8NCK7 471 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 OR5T3Q8NGG3 340 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 LILRB1Q8NHL6 650 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 ZNF285Q96NJ3 590 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 CDC6Q99741 560 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 MTHFD2LQ9H903 347 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 C14orf119Q9NWQ9 140 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PSORS1C1Q9UIG5 152 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 PLCL2Q9UPR0 1127 aa12.86□□□□□ -0.35
CSNK1E-201ENST00000359867 COL27A1Q8IZC6 1860 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 B8ZZF3 427 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SGK494L7N484 410 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 UGT2B17O75795 530 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 MED26O95402 600 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SOX18P35713 384 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 C19orf57Q0VDD7 668 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CARFQ8N187 725 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 GALNT6Q8NCL4 622 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 TMEM52Q8NDY8 209 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 PRRC1Q96M27 445 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 ARHGDIGQ99819 225 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 TMEM246Q9BRR3 403 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 FNDC11Q9BVV2 318 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 PIGUQ9H490 435 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SP140LQ9H930 580 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CPNE5Q9HCH3 593 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 FGF21Q9NSA1 209 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SLC13A4Q9UKG4 626 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CLCA2Q9UQC9 943 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 M0R3H8 397 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 POLR1CO15160 346 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 LDB3O75112 727 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 RFPL3O75679 317 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CCNKO75909 580 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SOX30O94993 753 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CDC20Q12834 499 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 ARMCX4Q5H9R4 360 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 KLHL17Q6TDP4 642 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 DHRS13Q6UX07 377 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 CCBE1Q6UXH8 406 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 OLIG3Q7RTU3 272 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 SLC46A3Q7Z3Q1 461 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 COMTD1Q86VU5 262 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 STX19Q8N4C7 294 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 OR1L3Q8NH93 324 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 ANKRD9Q96BM1 317 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 WFDC6Q9BQY6 131 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 UCK2Q9BZX2 261 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 POLHQ9Y253 713 aa12.85□□□□□ -0.35
CSNK1E-201ENST00000359867 A0A0G2JMP0 313 aa12.84□□□□□ -0.35
CSNK1E-201ENST00000359867 A0A0X1KG70 313 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms