RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 LOC102723996A0A087X1L8 192 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SMNDC1O75940 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CLIC3O95833 236 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CSTAP01040 98 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CCL4P13236 92 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 IL12BP29460 328 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 POLR2IP36954 125 aaKnown RBP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 STAT5AP42229 794 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 RFX3P48380 749 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 EFNA3P52797 238 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 RNF4P78317 190 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 IL5RAQ01344 420 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CD47Q08722 323 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 TSPAN31Q12999 210 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 CDK5R2Q13319 367 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 RAPSNQ13702 412 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 EFR3AQ14156 821 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SEC23BQ15437 767 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 OR1Q1Q15612 314 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 RAB11FIP2Q7L804 512 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 GDF7Q7Z4P5 450 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 C9orf40Q8IXQ3 194 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 PRSS58Q8IYP2 241 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 MR1Q95460 341 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 GTPBP3Q969Y2 492 aaKnown RBP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 NACC2Q96BF6 587 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 ULBP3Q9BZM4 244 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 POLR1BQ9H9Y6 1135 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 DNAJB12Q9NXW2 375 aaKnown RBP12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SCN3BQ9NY72 215 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SELENONQ9NZV5 590 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 KLK13Q9UKR3 277 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 TMEM5Q9Y2B1 443 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 TPRKBQ9Y3C4 175 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 LOXL2Q9Y4K0 774 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 PCDHGB5Q9Y5G0 923 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SPTBN2O15020 2390 aa12.43□□□□□ -0.42
CCDC197-201ENST00000359253 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 TRABD2BA6NFA1 517 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 OR6C70A6NIJ9 312 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 ZAR1LA6NP61 321 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CHP2O43745 196 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 TSPAN2O60636 221 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 DXOO77932 396 aaKnown RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 RAB40ALP0C0E4 278 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 SMIM18P0DKX4 95 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CRHBPP24387 322 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 SLC6A8P48029 635 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 COPZ1P61923 177 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PTGES3Q15185 160 aaKnown RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 TMEM164Q5U3C3 297 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 ULK3Q6PHR2 472 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PAPD4Q6PIY7 484 aaKnown RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 LANCL3Q6ZV70 420 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 ZER1Q7Z7L7 766 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 HMGN2P46Q86SG4 172 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 ZAR1Q86SH2 424 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 MISPQ8IVT2 679 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CDK20Q8IZL9 346 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 SLC43A2Q8N370 569 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CLDN22Q8N7P3 220 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 ZNF321PQ8N8H1 164 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 FAM71CQ8NEG0 241 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 DNAJA4Q8WW22 397 aaPredicted RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 IPCEF1Q8WWN9 437 aaPredicted RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CNOT9Q92600 299 aaKnown RBP12.42□□□□□ -0.42
CCDC197-201ENST00000359253 GAL3ST4Q96RP7 486 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 TEX12Q9BXU0 123 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PRRG3Q9BZD7 231 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 VCX3AQ9NNX9 186 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 CCNB1IP1Q9NPC3 277 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 REV1Q9UBZ9 1251 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PADI1Q9ULC6 663 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PCDHGA6Q9Y5G7 932 aa12.42□□□□□ -0.42
CCDC197-201ENST00000359253 PTPRBP23467 1997 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 A0A0B4J2E0 115 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 CENPVL1A0A0U1RR11 272 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 A0A1B0GX12 115 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 A0A1W2PQ72 361 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 SH3D21A4FU49 640 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 DPPA5A6NC42 116 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 TMEM8BA6NDV4 472 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 FRS3O43559 492 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 EIF4E2O60573 245 aaKnown RBP12.41□□□□□ -0.42
CCDC197-201ENST00000359253 REM1O75628 298 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ZFAND5O76080 213 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 UTS2O95399 124 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 ANGPTL1O95841 491 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 IGF2P01344 180 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 JMJD7P0C870 316 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 CYP4B1P13584 511 aa12.41□□□□□ -0.42
CCDC197-201ENST00000359253 MMP11P24347 488 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms