RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 OR52B6Q8NGF0 335 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 DUSP21Q9H596 190 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ACSS1Q9NUB1 689 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 MYO16Q9Y6X6 1858 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 GATCO43716 136 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PIPP12273 146 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ITPKBP27987 946 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CALCRP30988 508 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RAD52P43351 418 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 MASP1P48740 699 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PLA2G7Q13093 441 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PARPBPQ9NWS1 579 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CD84Q9UIB8 345 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NUP98P52948 1817 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NT5EP21589 574 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RAB13P51153 203 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ERVPABLB-1P60509 514 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FAM199XQ6PEV8 388 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 IL34Q6ZMJ4 242 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NAGSQ8N159 534 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SCAMP5Q8TAC9 235 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PGAP2Q9UHJ9 254 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SPI1P17947 270 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NRG3P56975 720 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 AAK1Q2M2I8 961 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF561Q8N587 486 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 DNAAF1Q8NEP3 725 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SPRYD4Q8WW59 207 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SEC22CQ9BRL7 303 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 C1QTNF7Q9BXJ2 289 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FAM208AQ9UK61 1670 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 AK4P27144 223 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 BMP8BP34820 402 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 KIR2DL3P43628 341 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ENPP2Q13822 863 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 BMP8AQ7Z5Y6 402 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FAM129CQ86XR2 697 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 WDTC1Q8N5D0 677 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SAMD8Q96LT4 415 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SLIRPQ9GZT3 109 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NMUR1Q9HB89 426 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ACKR4Q9NPB9 350 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 LRRC72A6NJI9 287 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CAV2P51636 162 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 KIF1AQ12756 1690 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 VEZF1Q14119 521 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PPA1Q15181 289 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RGMBQ6NW40 437 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 KCNIP4Q6PIL6 250 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FIGNL1Q6PIW4 674 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TEX261Q6UWH6 196 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 MOAP1Q96BY2 351 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RAB11FIP5Q9BXF6 653 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 POLDIP3Q9BY77 421 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ASAH2Q9NR71 780 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CENPMQ9NSP4 180 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NDRG4Q9ULP0 352 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 U3KQ87 197 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 AKAP12Q02952 1782 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 BTBD17A6NE02 478 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SGK494L7N484 410 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RNASET2O00584 256 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 P2RX6O15547 441 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CNR1P21554 472 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CMPK1P30085 196 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 IL13RA1P78552 427 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 GAB1Q13480 694 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TP53I3Q53FA7 332 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 NPWQ8N729 165 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PXYLP1Q8TE99 480 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 IMP4Q96G21 291 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TCEAL2Q9H3H9 227 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SNED1Q8TER0 1413 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CD68P34810 354 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SNRPEP62304 92 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PITX1P78337 314 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 TMEM41BQ5BJD5 291 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FKBP1CQ5VVH2 108 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 LIPJQ5W064 366 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ZCCHC10Q8TBK6 192 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 SFXN5Q8TD22 340 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FAM46AQ96IP4 442 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 FZD8Q9H461 694 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RNF167Q9H6Y7 350 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 QTRT2Q9H974 415 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 COL1A2P08123 1366 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 GAPDHSO14556 408 aaPredicted RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 HCRTO43612 131 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ITGA5P08648 1049 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 DOC2AQ14183 400 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 RNF111Q6ZNA4 994 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF534Q76KX8 674 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF550Q7Z398 422 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ZNF679Q8IYX0 411 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 KDM8Q8N371 416 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 OR13C3Q8NGS6 347 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 CDCP1Q9H5V8 836 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 PNO1Q9NRX1 252 aaKnown RBP5.73□□□□□ -1.49
VPS13B-203ENST00000358544 ERVH48-1M5A8F1 160 aa5.73□□□□□ -1.49
VPS13B-203ENST00000358544 GPR143P51810 404 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms