RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 UBQLN3Q9H347 655 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 MED31Q9Y3C7 131 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LAMA3Q16787 3333 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 NLRC5Q86WI3 1866 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 UBE2QL1A1L167 161 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 A8MVJ9 347 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 B4GALT2O60909 372 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ADH1CP00326 375 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PTHLHP12272 177 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 CXCL3P19876 107 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ACADLP28330 430 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 STAT5AP42229 794 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GBX2P52951 348 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SEC13P55735 322 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PITPNAQ00169 270 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 TMEM44Q2T9K0 475 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 PYHIN1Q6K0P9 492 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 C1orf94Q6P1W5 598 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 GDF7Q7Z4P5 450 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SLITRK4Q8IW52 837 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 HDDC3Q8N4P3 179 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 OR8S1Q8NH09 359 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SLX1AQ9BQ83 275 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 ORAI3Q9BRQ5 295 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LGR4Q9BXB1 951 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 RNF32Q9H0A6 362 aa6.14□□□□□ -1.43
CSDE1-203ENST00000358528 SIRT3Q9NTG7 399 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-203ENST00000358528 LOC100509620A0A075B734 347 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 A0A1W2PR48 441 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SHISA3A0PJX4 238 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CDHR4A6H8M9 788 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ACOD1A6NK06 481 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 DUXAA6NLW8 204 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 FAM25EA8MYX2 175 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 E9PI62 339 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 STK25O00506 426 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 LDB3O75112 727 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 TFP02787 698 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 FBXO45P0C2W1 286 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 HPGDP15428 266 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CSF2RAP15509 400 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 HIST1H1TP22492 207 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CMPK1P30085 196 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PPM1AP35813 382 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 VEGFCP49767 419 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CRMP1Q14194 572 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ATXN7L3Q14CW9 347 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 AGERQ15109 404 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 HBMQ6B0K9 141 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ALKAL2Q6UX46 152 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 VITQ6UXI7 678 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 GPR155Q7Z3F1 870 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 HDDC2Q7Z4H3 204 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 GID4Q8IVV7 300 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 YAF2Q8IY57 180 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 GATSQ8NAP1 163 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ACOT12Q8WYK0 555 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SMPDL3BQ92485 455 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 KIAA1143Q96AT1 154 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ZSWIM3Q96MP5 696 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 DDOQ99489 341 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SEC22CQ9BRL7 303 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 LMAN2LQ9H0V9 348 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SLITRK2Q9H156 845 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 FN3KQ9H479 309 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 C6orf106Q9H6K1 298 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PHPT1Q9NRX4 125 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 TAS2R10Q9NYW0 307 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 KCND3Q9UK17 655 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CDH10Q9Y6N8 788 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SPACA6W5XKT8 324 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PRAMEF27A3QJZ7 478 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 HIDE1A8MVS5 230 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ARPC5O15511 151 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CDC123O75794 336 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 RCBTB2O95199 551 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 DRD2P14416 443 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 TEAD1P28347 426 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 LIMS1P48059 325 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SOX9P48436 509 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CDK5Q00535 292 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 DEFA5Q01523 94 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PUS10Q3MIT2 529 aaKnown RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 TMEM201Q5SNT2 666 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ERN2Q76MJ5 926 aaKnown RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 MEPCEQ7L2J0 689 aaKnown RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF547Q8IVP9 402 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 OR5M3Q8NGP4 307 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ABHD4Q8TB40 342 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 NXPE3Q969Y0 559 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 CNRIP1Q96F85 164 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SENP5Q96HI0 755 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ABHD1Q96SE0 405 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PDCD1LG2Q9BQ51 273 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 ARL6Q9H0F7 186 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 AUNIPQ9H7T9 357 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 SYNPO2LQ9H987 977 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 PFDN2Q9UHV9 154 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 FBXL4Q9UKA2 621 aa6.13□□□□□ -1.43
CSDE1-203ENST00000358528 BAIAP2Q9UQB8 552 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms