RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 CSNK2A2P19784 350 aaPredicted RBP20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 FEN1P39748 380 aaKnown RBP20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 SPIBQ01892 262 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 DUSP2Q05923 314 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 CEBPEQ15744 281 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 DEFB110Q30KQ9 67 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 BICRALQ6AI39 1079 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 FAM92BQ6ZTR7 304 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 CCDC116Q8IYX3 515 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 HORMAD2Q8N7B1 307 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 NANOGP1Q8N7R0 232 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 EDAQ92838 391 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 RLIMQ9NVW2 624 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 NCOR1O75376 2440 aa20.81■□□□□ 0.92
POLR2J2-202ENST00000358438 A0A1W2PS29 197 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 TMEM229AB2RXF0 380 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 LYRM1O43325 122 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 SLC2A2P11168 524 aaPredicted RBP20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 SOX3P41225 446 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 DHPSP49366 369 aaPredicted RBP20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 HMGA2P52926 109 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 EXOC3L2Q2M3D2 409 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 COL28A1Q2UY09 1125 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 TNFAIP8L2Q6P589 184 aaPredicted RBP20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 PRSS41Q7RTY9 318 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 WDR5BQ86VZ2 330 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 SPPL2AQ8TCT8 520 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 CREB3L1Q96BA8 519 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 TRMT61AQ96FX7 289 aaKnown RBP20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 CCDC120Q96HB5 630 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 C10orf90Q96M02 699 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 ZNF681Q96N22 645 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 RANBP3Q9H6Z4 567 aaPredicted RBP20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 SEMA3GQ9NS98 782 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 ZNF780BQ9Y6R6 833 aa20.8■□□□□ 0.92
POLR2J2-202ENST00000358438 RHPN2P1A8MT19 583 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 SGK494L7N484 410 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 DNAJB6O75190 326 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 MPIP34949 423 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 HNRNPA0Q13151 305 aaKnown RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 DOC2BQ14184 412 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 SLC25A45Q8N413 288 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ZNF578Q96N58 590 aaPredicted RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 PPP1R3EQ9H7J1 279 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 STARD5Q9NSY2 213 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ZCCHC3Q9NUD5 404 aaKnown RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TXNL4BQ9NX01 149 aaKnown RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 NDOR1Q9UHB4 597 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TMCC3Q9ULS5 477 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 SLC22A7Q9Y694 548 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ZNF860A6NHJ4 632 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TPOP07202 933 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ALPPL2P10696 532 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 HK1P19367 917 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 PTGER1P34995 402 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 PPM1FP49593 454 aaPredicted RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 CRISP1P54107 249 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 SRSF5Q13243 272 aaKnown RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 COL9A2Q14055 689 aaPredicted RBP20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 C6orf132Q5T0Z8 1188 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TMEM64Q6YI46 380 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 SZRD1Q7Z422 152 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 PHC2Q8IXK0 858 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ZNF680Q8NEM1 530 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TCTN2Q96GX1 697 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 LYRM4Q9HD34 91 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 TMEM74BQ9NUR3 256 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 ANGPT4Q9Y264 503 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 CSNK1G3Q9Y6M4 447 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 RNF215Q9Y6U7 377 aa20.79■□□□□ 0.92
POLR2J2-202ENST00000358438 I3L521 148 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 FHP07954 510 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 CKMT1AP12532 417 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 TLX1P31314 330 aaPredicted RBP20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 LIMS1P48059 325 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 EPHA4P54764 986 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 CDH12P55289 794 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 PMS2CLQ68D20 193 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 MCATQ8IVS2 390 aaKnown RBP20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 SLC30A8Q8IWU4 369 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 POLR2J2Q9GZM3 115 aaKnown RBP20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 A4GALTQ9NPC4 353 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 LRIT1Q9P2V4 623 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 FBXO9Q9UK97 447 aaPredicted RBP20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 RPL36Q9Y3U8 105 aaKnown RBP20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 CACNA1EQ15878 2313 aa20.78■□□□□ 0.92
POLR2J2-202ENST00000358438 GALR3O60755 368 aaPredicted RBP20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 CTSBP07858 339 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 MSL3P1P0C860 447 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 GNSP15586 552 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 GFERP55789 205 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 PCBP3P57721 371 aaKnown RBP20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 CLLU1Q5K131 121 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 UPRTQ96BW1 309 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 KCNJ15Q99712 375 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 SERHL2Q9H4I8 314 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 PRDM9Q9NQV7 894 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 RABL2AQ9UBK7 228 aaPredicted RBP20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 HMGN4O00479 90 aa20.77■□□□□ 0.92
POLR2J2-202ENST00000358438 LAMTOR5O43504 91 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms