RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 TRIM3O75382 744 aaPredicted RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 CYP7B1O75881 506 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 GKN3PP0CG01 181 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 UBL4AP11441 157 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 PRG2P13727 222 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 RFC3P40938 356 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 CLK3P49761 638 aaKnown RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 HOXC5Q00444 222 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 SKP2Q13309 424 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 COLEC12Q5KU26 742 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 PCSK4Q6UW60 755 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 RBM45Q8IUH3 476 aaKnown RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 OR2M7Q8NG81 312 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 OR52E4Q8NGH9 312 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 HSH2DQ96JZ2 352 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 JSRP1Q96MG2 331 aaPredicted RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 RAB3IPQ96QF0 476 aaPredicted RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 CACYBPQ9HB71 228 aaKnown RBP23.16■■□□□ 1.3
SSBP3-202ENST00000357475 ADPRHL2Q9NX46 363 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 PCDHGB7Q9Y5F8 929 aa23.16■■□□□ 1.3
SSBP3-202ENST00000357475 SUV39H1O43463 412 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 PEX1O43933 1283 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 IFNA14P01570 189 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 ADH7P40394 386 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 OR1E2P47887 323 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 FOXO1Q12778 655 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 CCNIQ14094 377 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 NADK2Q4G0N4 442 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 Q6ZS92 163 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 VANGL1Q8TAA9 524 aaPredicted RBP23.15■■□□□ 1.3
SSBP3-202ENST00000357475 OIT3Q8WWZ8 545 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 PRR14Q9BWN1 585 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 MED11Q9P086 117 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 LUZP4Q9P127 313 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 PPP4R1LQ9P1A2 415 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 FBXL2Q9UKC9 423 aa23.15■■□□□ 1.3
SSBP3-202ENST00000357475 LRRC3CA6NJW4 275 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 GTPBP1O00178 669 aaKnown RBP23.14■■□□□ 1.3
SSBP3-202ENST00000357475 AP3D1O14617 1153 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 ZNF264O43296 627 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 HCRTR2O43614 444 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 CIB2O75838 187 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 LGI1O95970 557 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 PMP22Q01453 160 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 RHDQ02161 417 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 KPNB1Q14974 876 aaKnown RBP23.14■■□□□ 1.3
SSBP3-202ENST00000357475 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.14■■□□□ 1.3
SSBP3-202ENST00000357475 LRGUKQ96M69 825 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 GNRHR2Q96P88 292 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 ARHGDIGQ99819 225 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 ADNPQ9H2P0 1102 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 OLAHQ9NV23 265 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 TUBD1Q9UJT1 453 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 SLC35A3Q9Y2D2 325 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 KLF13Q9Y2Y9 288 aaPredicted RBP23.14■■□□□ 1.3
SSBP3-202ENST00000357475 SH3GLB1Q9Y371 365 aa23.14■■□□□ 1.3
SSBP3-202ENST00000357475 TRAV17A0A0B4J275 112 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 H3BNH8 94 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 SNPHO15079 494 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 MEOX1P50221 254 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 C17orf67Q0P5P2 114 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 ZNF169Q14929 603 aaPredicted RBP23.13■■□□□ 1.29
SSBP3-202ENST00000357475 TBCELQ5QJ74 424 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 CMIPQ8IY22 773 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 EID3Q8N140 333 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 TMCO5AQ8N6Q1 288 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 TMEM41AQ96HV5 264 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 FAM173AQ9BQD7 235 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 DENND2DQ9H6A0 471 aaPredicted RBP23.13■■□□□ 1.29
SSBP3-202ENST00000357475 RPS6KA6Q9UK32 745 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 ICAM5Q9UMF0 924 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 SAMD4AQ9UPU9 718 aaKnown RBP23.13■■□□□ 1.29
SSBP3-202ENST00000357475 NTNG1Q9Y2I2 539 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 CFAP73A6NFT4 308 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 TPST2O60704 377 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 SNX4O95219 450 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 FREM3P0C091 2139 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 MASP1P48740 699 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 ELOAQ14241 798 aaKnown RBP23.13■■□□□ 1.29
SSBP3-202ENST00000357475 NPTX1Q15818 432 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 PLEKHN1Q494U1 663 aaPredicted RBP23.13■■□□□ 1.29
SSBP3-202ENST00000357475 PACS2Q86VP3 889 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 SPATA24Q86W54 205 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 OR2M3Q8NG83 312 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 DSN1Q9H410 356 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 BAG5Q9UL15 447 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 LHX6Q9UPM6 363 aa23.13■■□□□ 1.29
SSBP3-202ENST00000357475 WISP1O95388 367 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 RFPL3SP0C7P2 107 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 RYKP34925 604 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 CCR4P51679 360 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 ZNF136P52737 540 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 LY6DQ14210 128 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 NRF1Q16656 503 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 EIPR1Q53HC9 387 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 SLC6A19Q695T7 634 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 TIGD3Q6B0B8 471 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 CARM1Q86X55 608 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 GRAMD2AQ8IUY3 354 aa23.12■■□□□ 1.29
SSBP3-202ENST00000357475 MISPQ8IVT2 679 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms