RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 COL26A1Q96A83 441 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF689Q96CS4 500 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 LRRC46Q96FV0 321 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 C16orf58Q96GQ5 468 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 C19orf43Q9BQ61 176 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PDCD10Q9BUL8 212 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MED20Q9H944 212 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SF3B6Q9Y3B4 125 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 HELZP42694 1942 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 A0A1B0GVI7 797 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TEX46H3BTG2 121 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 AIPO00170 330 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SOCS6O14544 535 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SCAMP1O15126 338 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 RASGRP1O95267 797 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 FGBP02675 491 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 RLN2P04090 185 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 HMGN2P05204 90 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MRPL3P09001 348 aaKnown RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SMIM6P0DI80 62 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 PRMT2P55345 433 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR10A3P58181 314 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLC3A1Q07837 685 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF311Q5JNZ3 666 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 C9orf64Q5T6V5 341 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 VRK2Q86Y07 508 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 KLHL36Q8N4N3 616 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 VN1R2Q8NFZ6 395 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 DOK4Q8TEW6 326 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SFXN2Q96NB2 322 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 ARHGAP9Q9BRR9 750 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 THAP7Q9BT49 309 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MED18Q9BUE0 208 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 DNTTIP1Q9H147 329 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 OSGEPL1Q9H4B0 414 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 SIRT3Q9NTG7 399 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 MAN2C1Q9NTJ4 1040 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 IL36AQ9UHA7 158 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 WNT6Q9Y6F9 365 aa7.7□□□□□ -1.18
CDC42SE1-201ENST00000357235 TRBV23-1A0A0A0MS06 115 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 A0A1W2PS29 197 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TMEM129A0AVI4 362 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 PMS2P1A4D2B8 440 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 STK25O00506 426 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 LATO43561 262 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 HYAL3O43820 417 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SELENOFO60613 162 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 EIF3GO75821 320 aaKnown RBP eCLIP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 UBXN7O94888 489 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CHRM4P08173 479 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NMBP08949 121 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACAA1P09110 424 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CD3GP09693 182 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CTSAP10619 480 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACADLP28330 430 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 STARP49675 285 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 STXBP1P61764 594 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ERVK-25P63136 954 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 OPCMLQ14982 345 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ZNF697Q5TEC3 545 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CD276Q5ZPR3 534 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 FAM83HQ6ZRV2 1179 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CPOQ8IVL8 374 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 C12orf45Q8N5I9 185 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 OR10H4Q8NGA5 316 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 BBS10Q8TAM1 723 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 PIGKQ92643 395 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TFGQ92734 400 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ELP4Q96EB1 424 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 AIF1LQ9BQI0 150 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SGPP1Q9BX95 441 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 GLIPR2Q9H4G4 154 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 C8orf33Q9H7E9 229 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 TM7SF3Q9NS93 570 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 IMP3Q9NV31 184 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SLCO1C1Q9NYB5 712 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACAD8Q9UKU7 415 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 EXOSC1Q9Y3B2 195 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 KCNE3Q9Y6H6 103 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 REM1O75628 298 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 RGS11O94810 467 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ATG12O94817 140 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACP5P13686 325 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 DRD5P21918 477 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SHC1P29353 583 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 LCN1P31025 176 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ACVR1BP36896 505 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CAPZA1P52907 286 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 CDK5Q00535 292 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NTRK2Q16620 822 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 MINDY4Q4G0A6 757 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 VASNQ6EMK4 673 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 PLBD1Q6P4A8 553 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 IKBIPQ70UQ0 350 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 PARS2Q7L3T8 475 aaKnown RBP7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 SYT9Q86SS6 491 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 ADIPOR2Q86V24 386 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NUDT13Q86X67 352 aa7.69□□□□□ -1.18
CDC42SE1-201ENST00000357235 NKAIN4Q8IVV8 208 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms