RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 PDE7AQ13946 482 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 PLA1AQ53H76 456 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 C1orf94Q6P1W5 598 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 TMEFF1Q8IYR6 380 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 OR6M1Q8NGM8 313 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 OR8S1Q8NH09 359 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 SNX33Q8WV41 574 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 RGMAQ96B86 450 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 OR14A2Q96R54 314 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 MICU1Q9BPX6 476 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 OR52D1Q9H346 318 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 ERVMER34-1Q9H9K5 563 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 SDHAF2Q9NX18 166 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 SLCO1C1Q9NYB5 712 aa12.7□□□□□ -0.38
TRIM4-203ENST00000355947 LOC100509620A0A075B734 347 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 IRGMA1A4Y4 181 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 RASGRP1O95267 797 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 DUSP2Q05923 314 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 BEX5Q5H9J7 111 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 APOOLQ6UXV4 268 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 NLRC3Q7RTR2 1065 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 RD3Q7Z3Z2 195 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 MORN4Q8NDC4 146 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 TOR1AIP2Q8NFQ8 470 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 OR5J2Q8NH18 312 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ABHD4Q8TB40 342 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ASB12Q8WXK4 309 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 OSTF1Q92882 214 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SLC41A3Q96GZ6 507 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ATG4BQ9Y4P1 393 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 CDHR4A6H8M9 788 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 CSN2P05814 226 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 LIPCP11150 499 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 FGF9P31371 208 aaPredicted RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ADH7P40394 386 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ANXA11P50995 505 aaKnown RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 NTHL1P78549 312 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 TSPAN31Q12999 210 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 HENMT1Q5T8I9 393 aaKnown RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 C3P1Q6ZMU1 363 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 NUP43Q8NFH3 380 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 AMDHD1Q96NU7 426 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 UBQLN3Q9H347 655 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 NT5DC2Q9H857 520 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SYNPO2LQ9H987 977 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 DLL4Q9NR61 685 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 IL36AQ9UHA7 158 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PFDN2Q9UHV9 154 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SEC16AO15027 2179 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 A8MVJ9 347 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SGK494L7N484 410 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 FOXE1O00358 373 aaPredicted RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SHOXO15266 292 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PPP1R3DO95685 299 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 MT-ND5P03915 603 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 FBXO45P0C2W1 286 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ATF1P18846 271 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 CCR8P51685 355 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 AKR1C2P52895 323 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 TAS2R38P59533 333 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SIM1P81133 766 aaPredicted RBP12.69□□□□□ -0.38
TRIM4-203ENST00000355947 AKR1C1Q04828 323 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ARHGAP15Q53QZ3 475 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 ZDHHC20Q5W0Z9 365 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PYHIN1Q6K0P9 492 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 TRILQ7L0X0 811 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 PRSS42Q7Z5A4 293 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 IFNL1Q8IU54 200 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 RFLNBQ8N5W9 214 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 SLC16A11Q8NCK7 471 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 OR4K13Q8NH42 304 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 MED18Q9BUE0 208 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 GHITMQ9H3K2 345 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 NUBP2Q9Y5Y2 271 aa12.69□□□□□ -0.38
TRIM4-203ENST00000355947 OR52A4PA6NMU1 304 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 EPPINO95925 133 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 HK1P19367 917 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 PDX1P52945 283 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 SLC9A5Q14940 896 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 COL28A1Q2UY09 1125 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 FNDC3BQ53EP0 1204 aaKnown RBP12.68□□□□□ -0.38
TRIM4-203ENST00000355947 EOGTQ5NDL2 527 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 OAFQ86UD1 273 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 SLC44A3Q8N4M1 653 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 C20orf85Q9H1P6 137 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 FGF20Q9NP95 211 aaPredicted RBP12.68□□□□□ -0.38
TRIM4-203ENST00000355947 KLHL42Q9P2K6 505 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 SLC23A2Q9UGH3 650 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 CBLCQ9ULV8 474 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 SCN10AQ9Y5Y9 1956 aa12.68□□□□□ -0.38
TRIM4-203ENST00000355947 SURF4O15260 269 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms