RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ART1P52961 327 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 NME5P56597 212 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 SMU1Q2TAY7 513 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 LSM12Q3MHD2 195 aaKnown RBP15□□□□□ -0.01
PDLIM7-201ENST00000355572 SPDYE7PQ495Y7 208 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 SPNS3Q6ZMD2 512 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 HMGN2P46Q86SG4 172 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF610Q8N9Z0 462 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 B4GALNT2Q8NHY0 566 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 PHOSPHO1Q8TCT1 267 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 WDR55Q9H6Y2 383 aaPredicted RBP15□□□□□ -0.01
PDLIM7-201ENST00000355572 ATAD3AQ9NVI7 634 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 MARCOQ9UEW3 520 aaPredicted RBP15□□□□□ -0.01
PDLIM7-201ENST00000355572 ST6GALNAC2Q9UJ37 374 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 AP4B1Q9Y6B7 739 aa15□□□□□ -0.01
PDLIM7-201ENST00000355572 GOLGA8QA0A0J9YX86 632 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 RNF103-CHMP3A0A140T963 221 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 C7orf72A4D263 438 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 GOLGA8OA6NCC3 632 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 GOLGA8NF8WBI6 632 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 RNASET2O00584 256 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 MSTNO14793 375 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 SNNO75324 88 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 CPSF4O95639 269 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 KLK2P20151 261 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 MATN1P21941 496 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 LCN1P31025 176 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 EIF1AXP47813 144 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 CPA2P48052 419 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 UFM1P61960 85 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 MAPK14Q16539 360 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 BEND6Q5SZJ8 279 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 CHDHQ8NE62 594 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 OR8J2Q8NGG1 315 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 OR4A15Q8NGL6 344 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 GOT1L1Q8NHS2 421 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 RAB8BQ92930 207 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 TLCD1Q96CP7 247 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 WFIKKN1Q96NZ8 548 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 SRXN1Q9BYN0 137 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 DPY30Q9C005 99 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 OR51I1Q9H343 314 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 PIGMQ9H3S5 423 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 PLEKHF2Q9H8W4 249 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 SLC24A3Q9HC58 644 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 NEUROD4Q9HD90 331 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 FAF1Q9UNN5 650 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF175Q9Y473 711 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 TESMINQ9Y4I5 508 aa14.99□□□□□ -0.01
PDLIM7-201ENST00000355572 SH3D21A4FU49 640 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 OR12D1P0DN82 309 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 LBPP18428 481 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 EPHA3P29320 983 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 SFTPDP35247 375 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 CDKN2CP42773 168 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 ATP12AP54707 1039 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 MAD2L1Q13257 205 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 CASP8Q14790 479 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 PDZK1Q5T2W1 519 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 TNFAIP8L2Q6P589 184 aaPredicted RBP14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 CHMP1BQ7LBR1 199 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF550Q7Z398 422 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 KIF18BQ86Y91 864 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF614Q8N883 585 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 FBXO27Q8NI29 283 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 GPR119Q8TDV5 335 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 ACTRT2Q8TDY3 377 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 TESCQ96BS2 214 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 ZG16BQ96DA0 208 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 SLC35G5Q96KT7 338 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 MARK4Q96L34 752 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 INPP5KQ9BT40 448 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 COQ10BQ9H8M1 238 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 TMBIM4Q9HC24 238 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 KLHL28Q9NXS3 571 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 MKLN1Q9UL63 735 aa14.98□□□□□ -0.01
PDLIM7-201ENST00000355572 A0A087WZY1 265 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 DEFB108AA8MXU0 73 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 LINC01387J3KSC0 135 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 ADAMDEC1O15204 470 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 UGT2B17O75795 530 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 NTN1O95631 604 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 CRHP06850 196 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 KITP10721 976 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 LOXP28300 417 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 P2RX1P51575 399 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 ZNF41P51814 821 aaPredicted RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 MAGOHP61326 146 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 RAC1P63000 192 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 GPR68Q15743 365 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 SGCBQ16585 318 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 FAM174BQ3ZCQ3 159 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 SAXO2Q658L1 398 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 HEPHL1Q6MZM0 1159 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 OGFOD2Q6N063 350 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 PPP4R4Q6NUP7 873 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 WDR75Q8IWA0 830 aaKnown RBP14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 HOMEZQ8IX15 550 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 NATD1Q8N6N6 113 aa14.97□□□□□ -0.01
PDLIM7-201ENST00000355572 OR2V1Q8NHB1 315 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms