RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 HMGB4Q8WW32 186 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 SPRYD4Q8WW59 207 aaPredicted RBP20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 SEMA6CQ9H3T2 930 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 MTCH2Q9Y6C9 303 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 LRP4O75096 1905 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 SOCS6O14544 535 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 CASKO14936 926 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 LALBAP00709 142 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 IGHV4-34P06331 123 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 CT62P0C5K7 136 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 CELP19835 753 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 CD79BP40259 229 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 CTBP2P56545 445 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 BAK1Q16611 211 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 GARNL3Q5VVW2 1013 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 PLBD1Q6P4A8 553 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 VWA5B2Q8N398 1253 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 PFN4Q8NHR9 129 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 BPIFA2Q96DR5 249 aa20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 TCEAL2Q9H3H9 227 aaPredicted RBP20.63■□□□□ 0.89
NKX2-1-201ENST00000354822 SPTY2D1-AS1A0A0U1RR47 76 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 SGK494L7N484 410 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 OR10H2O60403 315 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 CTSEP14091 401 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 TBXA2RP21731 343 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 PPP3R1P63098 170 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 EIF2B5Q13144 721 aaKnown RBP20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 ZMAT1Q5H9K5 638 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 PDZK1Q5T2W1 519 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 KIAA0895LQ68EN5 471 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 DNAJA4Q8WW22 397 aaPredicted RBP20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 OTULINQ96BN8 352 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 SYNDIG1Q9H7V2 258 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 CFL1P23528 166 aaKnown RBP20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 FXYD6P3P58550 94 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 ZNHIT3Q15649 155 aaPredicted RBP20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 ZSWIM7Q19AV6 140 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 PRPF38BQ5VTL8 546 aaKnown RBP20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 AGAP6Q5VW22 663 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 NIPAL3Q6P499 406 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 SMARCD3Q6STE5 483 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 GRAMD2AQ8IUY3 354 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 ZFP41Q8N8Y5 198 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 OR52R1Q8NGF1 315 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 OR51G2Q8NGK0 314 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 AGAP4Q96P64 663 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 TIGARQ9NQ88 270 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 CMC2Q9NRP2 79 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 INPP5EQ9NRR6 644 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 C20orf141Q9NUB4 165 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 BAIAP2Q9UQB8 552 aa20.62■□□□□ 0.89
NKX2-1-201ENST00000354822 NPIPA5A0A0B4J1W7 369 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 GXYLT2A0PJZ3 443 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 NPIPA7E9PJI5 369 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SEC14L5O43304 696 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 CBX7O95931 251 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 IGLV3-19P01714 112 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 NPIPA8P0DM63 369 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 CASP3P42574 277 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SKP1P63208 163 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 HHEXQ03014 270 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 NRARPQ7Z6K4 114 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC43A2Q8N370 569 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 LMF2Q9BU23 707 aaKnown RBP20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 TMED9Q9BVK6 235 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 TBC1D17Q9HA65 648 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 ATP13A2Q9NQ11 1180 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 ITGB1BP2Q9UKP3 347 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 POMT2Q9UKY4 750 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC22A31A6NKX4 558 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 FAM183AA6NL82 134 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 GABRPO00591 440 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 CHP2O43745 196 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 HCN1O60741 890 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 TMCC2O75069 709 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 GLULP15104 373 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 BLKP51451 505 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 ZNF791Q3KP31 576 aaPredicted RBP20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 METAP1DQ6UB28 335 aaPredicted RBP20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 CAMKK1Q8N5S9 505 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SIRT6Q8N6T7 355 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 CELF2-AS1Q8N7Q2 184 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SYT14Q8NB59 555 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 ATP6V1C2Q8NEY4 427 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 BABAM2Q9NXR7 383 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 SIGLEC7Q9Y286 467 aa20.61■□□□□ 0.89
NKX2-1-201ENST00000354822 RANBP2P49792 3224 aaKnown RBP20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 BLACEA4D250 179 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 RDH16O75452 317 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 OR2B6P58173 313 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 FOXK2Q01167 660 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 ASAH1Q13510 395 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 CCINQ13939 588 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 LRIT3Q3SXY7 679 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 ZNF544Q6NX49 715 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 MARCH9Q86YJ5 346 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 KLBQ86Z14 1044 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 NEIL3Q8TAT5 605 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 SLC35B4Q969S0 331 aa20.6■□□□□ 0.89
NKX2-1-201ENST00000354822 NACC2Q96BF6 587 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms