RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 GDF5P43026 501 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 MAT1AQ00266 395 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 TFF2Q03403 129 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 SOWAHCQ53LP3 525 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 TMPRSS11AQ6ZMR5 421 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 LRRC70Q7Z2Q7 622 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 REC114Q7Z4M0 266 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 ANKRD46Q86W74 232 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 KAT2AQ92830 837 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 C2orf88Q9BSF0 95 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 KLF16Q9BXK1 252 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 DDX31Q9H8H2 851 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 CHODLQ9H9P2 273 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 POFUT2Q9Y2G5 429 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 ZNF879B4DU55 563 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 KLF4O43474 513 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 GCM2O75603 506 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 CLDN9O95484 217 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 ZNF7P17097 686 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 SLC11A2P49281 568 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 PPP1R8Q12972 351 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 VMACQ2NL98 169 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 HIKESHIQ53FT3 197 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 PRAMEF13Q5VWM6 474 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 LHFPL3Q86UP9 236 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 FCGR1BQ92637 280 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 WBP2Q969T9 261 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 MRPS24Q96EL2 167 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 SLC6A16Q9GZN6 736 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 SMURF1Q9HCE7 757 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 PSORS1C1Q9UIG5 152 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 ANHXE9PGG2 379 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 UBE2CO00762 179 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 CCL16O15467 120 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 CBR3O75828 277 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 PRAMEF1O95521 474 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 CSF3P09919 207 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 NUDT7P0C024 238 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 GRK5P34947 590 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 NR0B1P51843 470 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 ZXDBP98169 803 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 B4GALNT1Q00973 533 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 SMN1Q16637 294 aaKnown RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 TCEAL6Q6IPX3 200 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 HAGHLQ6PII5 290 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 TRIM69Q86WT6 500 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 NXPE1Q8N323 547 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 OR4C15Q8NGM1 316 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 GPR151Q8TDV0 419 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 ELF4Q99607 663 aaPredicted RBP10.13□□□□□ -0.79
SND1-201ENST00000354725 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 SLC32A1Q9H598 525 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 SCN3BQ9NY72 215 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 CLCA3PQ9Y6N3 262 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 TICRRQ7Z2Z1 1910 aa10.13□□□□□ -0.79
SND1-201ENST00000354725 BRWD1Q9NSI6 2320 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 MUC22E2RYF6 1773 aaPredicted RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 CASC3O15234 703 aaKnown RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 SIGLEC5O15389 551 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 YY2O15391 372 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 TOX3O15405 576 aaPredicted RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 SLC43A1O75387 559 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 GATBO75879 557 aaKnown RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 TRBC1P01850 177 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 RHOCP08134 193 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 NMBP08949 121 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 ADRB3P13945 408 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 MAP2K3P46734 347 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 LIMS1P48059 325 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 CLDN20P56880 219 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 ECH1Q13011 328 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 UGT8Q16880 541 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 FRMPD2BQ6IN97 320 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 TCEAL4Q96EI5 215 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 MS4A3Q96HJ5 214 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 PCED1AQ9H1Q7 454 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 A0A1W2PN81 502 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 XKRY2A2RUG3 117 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 M0R233 179 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 CHP2O43745 196 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 ADAP1O75689 374 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 CD72P21854 359 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 CHRNA7P36544 502 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 RGS4P49798 205 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 IL5RAQ01344 420 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 NPRL3Q12980 569 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 FCN2Q15485 313 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 DUOXA1Q1HG43 343 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 LIPJQ5W064 366 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 ETV3LQ6ZN32 361 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 DUSP18Q8NEJ0 188 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 DNASE1L2Q92874 299 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 FAM120BQ96EK7 910 aaKnown RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 ZC3HAV1LQ96H79 300 aaKnown RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 SLC12A9Q9BXP2 914 aa10.12□□□□□ -0.79
SND1-201ENST00000354725 MRPL37Q9BZE1 423 aaKnown RBP10.12□□□□□ -0.79
SND1-201ENST00000354725 DPEP2Q9H4A9 486 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms