RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 RRP8O43159 456 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PPIHO43447 177 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TSPAN2O60636 221 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KRT33AO76009 404 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 DIRAS1O95057 198 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ALPLP05186 524 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KRT3P12035 628 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CA6P23280 308 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SAA4P35542 130 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NDST2P52849 883 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ERVK-8P63133 956 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RIGQ13278 110 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ARHGAP19Q14CB8 494 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 IZUMO4Q1ZYL8 232 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TIGITQ495A1 244 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FILIP1LQ4L180 1135 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KRTAP5-11Q6L8G4 156 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 MRPL10Q7Z7H8 261 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SERPINA9Q86WD7 417 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 COLGALT1Q8NBJ5 622 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 AQP11Q8NBQ7 271 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 BADQ92934 168 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 BIRC7Q96CA5 298 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 COQ2Q96H96 371 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ELMO2Q96JJ3 720 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TEKT3Q9BXF9 490 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SGK2Q9HBY8 427 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZBTB20Q9HC78 741 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 DUS2Q9NX74 493 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 HOXC10Q9NYD6 342 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TMEM181Q9P2C4 612 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PRPF19Q9UMS4 504 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CSDC2Q9Y534 153 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FAM208BQ5VWN6 2430 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 A0A0A6YYD4 124 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 A0A1W2PPV9 198 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LRIT2A6NDA9 550 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FBLL1A6NHQ2 334 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TMCO5BA8MYB1 307 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 WWP2O00308 870 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 JCHAINP01591 159 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 P04436 131 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SLC35G4P0C7Q5 338 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 PATE4P0C8F1 98 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ATP1B2P14415 290 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 UQCRBP14927 111 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 AADACP22760 399 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 CASQ1P31415 396 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SH3BGRP55822 239 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RPS6P62753 249 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RPL8P62917 257 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 TGFBIQ15582 683 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ZRSR1Q15695 479 aaKnown RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LY6G6FQ5SQ64 297 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 LRRC8BQ6P9F7 803 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 BTNL3Q6UXE8 466 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 HSD11B1LQ7Z5J1 315 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 GPR142Q7Z601 462 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NET1Q7Z628 596 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SERINC5Q86VE9 423 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 FAM89BQ8N5H3 189 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 KCNG3Q8TAE7 436 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 C10orf35Q96D05 121 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NOL4LQ96MY1 436 aaPredicted RBP1.38□□□□□ -2.19
BRCA1-202ENST00000354071 RCHY1Q96PM5 261 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 SLC29A3Q9BZD2 475 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 NTNG1Q9Y2I2 539 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 WIPI2Q9Y4P8 454 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 USP16Q9Y5T5 823 aa1.38□□□□□ -2.19
BRCA1-202ENST00000354071 ABCA10Q8WWZ4 1543 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 GRIN2BQ13224 1484 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PPIAL4CA0A0B4J2A2 164 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 IGHV3-20A0A0C4DH32 117 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ERVV-2B6SEH9 535 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 H3BTX0 84 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SURF4O15260 269 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CFLARO15519 480 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 STX11O75558 287 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 FGF19O95750 216 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 TSPAN13O95857 204 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 APRTP07741 180 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PPIAL4GP0DN37 164 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 AOC1P19801 751 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RFC4P35249 363 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 P2RY1P47900 373 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RPS14P62263 151 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 POU3F1Q03052 451 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 ATXN7L3Q14CW9 347 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 RAB35Q15286 201 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SLC25A52Q3SY17 297 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 SOHLH1Q5JUK2 328 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 FAM219BQ5XKK7 198 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 AWAT2Q6E213 333 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 PRR5LQ6MZQ0 368 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 METAP1DQ6UB28 335 aaPredicted RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 CWC27Q6UX04 472 aaKnown RBP1.37□□□□□ -2.19
BRCA1-202ENST00000354071 C17orf64Q86WR6 236 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 KATNAL2Q8IYT4 538 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 FBXL16Q8N461 479 aa1.37□□□□□ -2.19
BRCA1-202ENST00000354071 DMBX1Q8NFW5 382 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms